Lignocellulose degradation at the holobiont level: teamwork in a keystone soil invertebrate
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Title
Lignocellulose degradation at the holobiont level: teamwork in a keystone soil invertebrate
Authors
Keywords
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Journal
Microbiome
Volume 6, Issue 1, Pages -
Publisher
Springer Nature America, Inc
Online
2018-09-18
DOI
10.1186/s40168-018-0536-y
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Note: Only part of the references are listed.- Transcriptome analysis of the digestive system of a wood-feeding termite (Coptotermes formosanus) revealed a unique mechanism for effective biomass degradation
- (2018) Alei Geng et al. Biotechnology for Biofuels
- Feminizing Wolbachia influence microbiota composition in the terrestrial isopod Armadillidium vulgare
- (2018) Jessica Dittmer et al. Scientific Reports
- NMR studies on lignocellulose deconstructions in the digestive system of the lower termite Coptotermes formosanus Shiraki
- (2018) Didi Tarmadi et al. Scientific Reports
- The functional microbiome of arthropods
- (2017) Mauro Degli Esposti et al. PLoS One
- Lignocellulose pretreatment in a fungus-cultivating termite
- (2017) Hongjie Li et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Open questions: how does Wolbachia do what it does?
- (2016) Francis M. Jiggins BMC BIOLOGY
- MEGAHIT v1.0: A fast and scalable metagenome assembler driven by advanced methodologies and community practices
- (2016) Dinghua Li et al. METHODS
- Insect symbionts in food webs
- (2016) Ailsa H. C. McLean et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Biofilm feeding: Microbial colonization of food promotes the growth of a detritivorous arthropod
- (2016) Terezia Horvathova et al. ZooKeys
- MEGAN Community Edition - Interactive Exploration and Analysis of Large-Scale Microbiome Sequencing Data
- (2016) Daniel H. Huson et al. PLoS Computational Biology
- The genome of the crustacean Parhyale hawaiensis, a model for animal development, regeneration, immunity and lignocellulose digestion
- (2016) Damian Kao et al. eLife
- The Terrestrial Isopod Microbiome: An All-in-One Toolbox for Animal–Microbe Interactions of Ecological Relevance
- (2016) Didier Bouchon et al. Frontiers in Microbiology
- Diverse Bacteria with Lignin Degrading Potentials Isolated from Two Ranks of Coal
- (2016) Lu Wang et al. Frontiers in Microbiology
- Cellulose and hemicellulose decomposition by forest soil bacteria proceeds by the action of structurally variable enzymatic systems
- (2016) Rubén López-Mondéjar et al. Scientific Reports
- Insight into the indirect function of isopods in litter decomposition in mixed subtropical forests in China
- (2015) Yanyan Jia et al. APPLIED SOIL ECOLOGY
- BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs
- (2015) Felipe A. Simão et al. BIOINFORMATICS
- Fungal Cellulases
- (2015) Christina M. Payne et al. CHEMICAL REVIEWS
- Lignocellulose degradation mechanisms across the Tree of Life
- (2015) Simon M Cragg et al. CURRENT OPINION IN CHEMICAL BIOLOGY
- Lignin-degrading enzymes
- (2015) Loredano Pollegioni et al. FEBS Journal
- Litter-type specific microbial responses to the transformation of leaf litter into millipede feces
- (2015) François-Xavier Joly et al. SOIL BIOLOGY & BIOCHEMISTRY
- Metagenomic analysis of the microbiota in the highly compartmented hindguts of six wood- or soil-feeding higher termites
- (2015) Karen Rossmassler et al. Microbiome
- Exploring the microbiota dynamics related to vegetable biomasses degradation and study of lignocellulose-degrading bacteria for industrial biotechnological application
- (2015) Valeria Ventorino et al. Scientific Reports
- The role of Armadillidium vulgare (Isopoda: Oniscidea) in litter decomposition and soil organic matter stabilization
- (2014) Alexandra Špaldoňová et al. APPLIED SOIL ECOLOGY
- Trimmomatic: a flexible trimmer for Illumina sequence data
- (2014) Anthony M. Bolger et al. BIOINFORMATICS
- Phylogenomics of “Candidatus Hepatoplasma crinochetorum,” a Lineage of Mollicutes Associated with Noninsect Arthropods
- (2014) Sébastien Leclercq et al. Genome Biology and Evolution
- Nitrososphaera viennensis gen. nov., sp. nov., an aerobic and mesophilic, ammonia-oxidizing archaeon from soil and a member of the archaeal phylum Thaumarchaeota
- (2014) M. Stieglmeier et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Digestive enzymes of two brachyuran and two anomuran land crabs from Christmas Island, Indian Ocean
- (2014) Stuart M. Linton et al. JOURNAL OF COMPARATIVE PHYSIOLOGY B-BIOCHEMICAL SYSTEMIC AND ENVIRONMENTAL PHYSIOLOGY
- Plant-Polysaccharide-Degrading Enzymes from Basidiomycetes
- (2014) Johanna Rytioja et al. MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS
- Host tissues as microhabitats forWolbachiaand quantitative insights into the bacterial community in terrestrial isopods
- (2014) J. Dittmer et al. MOLECULAR ECOLOGY
- Comparative population genomics in animals uncovers the determinants of genetic diversity
- (2014) J. Romiguier et al. NATURE
- Symbiotic digestion of lignocellulose in termite guts
- (2014) Andreas Brune NATURE REVIEWS MICROBIOLOGY
- Potential of Cometabolic Transformation of Polysaccharides and Lignin in Lignocellulose by Soil Actinobacteria
- (2014) Tomáš Větrovský et al. PLoS One
- Evolutionary origin of insect-Wolbachia nutritional mutualism
- (2014) N. Nikoh et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Complementary symbiont contributions to plant decomposition in a fungus-farming termite
- (2014) Michael Poulsen et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The role of litter-feeding macroarthropods in decomposition processes: A reappraisal of common views
- (2014) J.F. David SOIL BIOLOGY & BIOCHEMISTRY
- Phenotypic Effect of “Candidatus Rickettsiella viridis,” a Facultative Symbiont of the Pea Aphid (Acyrthosiphon pisum), and Its Interaction with a Coexisting Symbiont
- (2013) Tsutomu Tsuchida et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Lignocellulose-degrading enzymes from termites and their symbiotic microbiota
- (2013) Jinfeng Ni et al. BIOTECHNOLOGY ADVANCES
- The abundance and variety of carbohydrate-active enzymes in the human gut microbiota
- (2013) Abdessamad El Kaoutari et al. NATURE REVIEWS MICROBIOLOGY
- Challenges in homology search: HMMER3 and convergent evolution of coiled-coil regions
- (2013) Jaina Mistry et al. NUCLEIC ACIDS RESEARCH
- The carbohydrate-active enzymes database (CAZy) in 2013
- (2013) Vincent Lombard et al. NUCLEIC ACIDS RESEARCH
- Comparative Metagenomic and Metatranscriptomic Analysis of Hindgut Paunch Microbiota in Wood- and Dung-Feeding Higher Termites
- (2013) Shaomei He et al. PLoS One
- phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data
- (2013) Paul J. McMurdie et al. PLoS One
- Metagenomic Insights into Metabolic Capacities of the Gut Microbiota in a Fungus-Cultivating Termite (Odontotermes yunnanensis)
- (2013) Ning Liu et al. PLoS One
- Structural characterization of a unique marine animal family 7 cellobiohydrolase suggests a mechanism of cellulase salt tolerance
- (2013) M. Kern et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Characterization of the Bacterial Community Associated with Larvae and Adults ofAnoplophora chinensisCollected in Italy by Culture and Culture-Independent Methods
- (2013) Aurora Rizzi et al. Biomed Research International
- Endogenous Plant Cell Wall Digestion: A Key Mechanism in Insect Evolution
- (2012) Nancy Calderón-Cortés et al. Annual Review of Ecology Evolution and Systematics
- Gene and translation initiation site prediction in metagenomic sequences
- (2012) Doug Hyatt et al. BIOINFORMATICS
- Oases: robust de novo RNA-seq assembly across the dynamic range of expression levels
- (2012) Marcel H. Schulz et al. BIOINFORMATICS
- Novel enzymes for the degradation of cellulose
- (2012) Svein Horn et al. Biotechnology for Biofuels
- Feminizing Wolbachia: a transcriptomics approach with insights on the immune response genes in Armadillidium vulgare
- (2012) Frédéric Chevalier et al. BMC MICROBIOLOGY
- dbCAN: a web resource for automated carbohydrate-active enzyme annotation
- (2012) Yanbin Yin et al. NUCLEIC ACIDS RESEARCH
- The influence of diet on the gut microbiota
- (2012) Karen P. Scott et al. PHARMACOLOGICAL RESEARCH
- Metagenomic Analysis of the Microbiota from the Crop of an Invasive Snail Reveals a Rich Reservoir of Novel Genes
- (2012) Alexander M. Cardoso et al. PLoS One
- Cellulases: ambiguous nonhomologous enzymes in a genomic perspective
- (2011) Leonid O. Sukharnikov et al. TRENDS IN BIOTECHNOLOGY
- Microbial enzyme systems for biomass conversion: emerging paradigms
- (2011) Michael E Himmel et al. Biofuels-UK
- Characterization of a Defined Cellulolytic and Xylanolytic Bacterial Consortium for Bioprocessing of Cellulose and Hemicelluloses
- (2010) Benedict C. Okeke et al. APPLIED BIOCHEMISTRY AND BIOTECHNOLOGY
- A novel salt-tolerant endo-β-1,4-glucanase Cel5A in Vibrio sp. G21 isolated from mangrove soil
- (2010) Zhaoming Gao et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- Production and characterization of cellulases and xylanases of Cellulosimicrobium cellulans grown in pretreated and extracted bagasse and minimal nutrient medium M9
- (2010) Jian-Min Song et al. BIOMASS & BIOENERGY
- Cellobiose Dehydrogenase: A Versatile Catalyst for Electrochemical Applications
- (2010) Roland Ludwig et al. CHEMPHYSCHEM
- Endogenous origin of endo-β-1,4-glucanase in common woodlouse Porcellio scaber (Crustacea, Isopoda)
- (2010) Rok Kostanjšek et al. JOURNAL OF COMPARATIVE PHYSIOLOGY B-BIOCHEMICAL SYSTEMIC AND ENVIRONMENTAL PHYSIOLOGY
- The last piece in the cellulase puzzle: the characterisation of -glucosidase from the herbivorous gecarcinid land crab Gecarcoidea natalis
- (2010) B. J. Allardyce et al. JOURNAL OF EXPERIMENTAL BIOLOGY
- Targeted Discovery of Glycoside Hydrolases from a Switchgrass-Adapted Compost Community
- (2010) Martin Allgaier et al. PLoS One
- Molecular insight into lignocellulose digestion by a marine isopod in the absence of gut microbes
- (2010) A. J. King et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Cellulolytic Systems in Insects
- (2009) Hirofumi Watanabe et al. Annual Review of Entomology
- Parallel metatranscriptome analyses of host and symbiont gene expression in the gut of the termite Reticulitermes flavipes
- (2009) Aurélien Tartar et al. Biotechnology for Biofuels
- Circos: An information aesthetic for comparative genomics
- (2009) M. Krzywinski et al. GENOME RESEARCH
- Wolbachia as a bacteriocyte-associated nutritional mutualist
- (2009) T. Hosokawa et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
- (2009) Ben Langmead et al. GENOME BIOLOGY
- Termite digestomes as sources for novel lignocellulases
- (2008) Michael E. Scharf et al. Biofuels Bioproducts & Biorefining-Biofpr
- Host-specificity of environmentally transmitted Mycoplasma-like isopod symbionts
- (2008) Sebastian Fraune et al. ENVIRONMENTAL MICROBIOLOGY
- Velvet: Algorithms for de novo short read assembly using de Bruijn graphs
- (2008) D. R. Zerbino et al. GENOME RESEARCH
- Purification and characterisation of endo- -1,4-glucanase and laminarinase enzymes from the gecarcinid land crab Gecarcoidea natalis and the aquatic crayfish Cherax destructor
- (2008) B. J. Allardyce et al. JOURNAL OF EXPERIMENTAL BIOLOGY
- Structural and chemical properties of grass lignocelluloses related to conversion for biofuels
- (2008) William F. Anderson et al. JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY
- Mapping and quantifying mammalian transcriptomes by RNA-Seq
- (2008) Ali Mortazavi et al. NATURE METHODS
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