Think Small: Nanopores for Sensing and Synthesis

Direct, Concurrent Measurements of the Forces and Currents Affecting DNA in a Nanopore with Comparable Topography

(2014) Edward M. Nelson et al.   ACS Nano

DNA Base Detection Using a Single-Layer MoS2

(2014) Amir Barati Farimani et al.   ACS Nano

Poretools: a toolkit for analyzing nanopore sequence data

(2014) N. J. Loman et al.   BIOINFORMATICS

Surface Charge Mapping with a Nanopipette

(2014) Kim McKelvey et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Single Cell Transfection with Single Molecule Resolution Using a Synthetic Nanopore

(2014) Volker Kurz et al.   NANO LETTERS

A draft map of the human proteome

(2014) Min-Sik Kim et al.   NATURE

Mass-spectrometry-based draft of the human proteome

(2014) Mathias Wilhelm et al.   NATURE

Decoding long nanopore sequencing reads of natural DNA

(2014) Andrew H Laszlo et al.   NATURE BIOTECHNOLOGY

Single-molecule site-specific detection of protein phosphorylation with a nanopore

(2014) Christian B Rosen et al.   NATURE BIOTECHNOLOGY

Characterization of Protein Unfolding with Solid-state Nanopores

(2014) Jiali Li et al.   PROTEIN AND PEPTIDE LETTERS

Sampling a Biomarker of the Human Immunodeficiency Virus across a Synthetic Nanopore

(2013) David J. Niedzwiecki et al.   ACS Nano

Compartmental Genomics in Living Cells Revealed by Single-Cell Nanobiopsy

(2013) Paolo Actis et al.   ACS Nano

Redox Cycling in Nanoscale-Recessed Ring-Disk Electrode Arrays for Enhanced Electrochemical Sensitivity

(2013) Chaoxiong Ma et al.   ACS Nano

Direct Visualization of Single-Molecule Translocations through Synthetic Nanopores Comparable in Size to a Molecule

(2013) Volker Kurz et al.   ACS Nano

Threading Immobilized DNA Molecules through a Solid-State Nanopore at >100 μs per Base Rate

(2013) Changbae Hyun et al.   ACS Nano

Single Protein Molecule Detection by Glass Nanopores

(2013) Wenhong Li et al.   ACS Nano

Scanning Electrochemical Cell Microscopy: A Versatile Technique for Nanoscale Electrochemistry and Functional Imaging

(2013) Neil Ebejer et al.   Annual Review of Analytical Chemistry

Automated Maximum Likelihood Separation of Signal from Baseline in Noisy Quantal Data

(2013) William J. Bruno et al.   BIOPHYSICAL JOURNAL

Unfoldase-mediated protein translocation through an α-hemolysin nanopore

(2013) Jeff Nivala et al.   NATURE BIOTECHNOLOGY

Multistep protein unfolding during nanopore translocation

(2013) David Rodriguez-Larrea et al.   Nature Nanotechnology

Molecule-hugging graphene nanopores

(2013) S. Garaj et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Tailoring the hydrophobicity of graphene for its use as nanopores for DNA translocation

(2013) Grégory F. Schneider et al.   Nature Communications

Detection and Quantification of Methylation in DNA using Solid-State Nanopores

(2013) Jiwook Shim et al.   Scientific Reports

Wild Type, Mutant Protein Unfolding and Phase Transition Detected by Single-Nanopore Recording

(2012) Céline Merstorf et al.   ACS Chemical Biology

Protein Transport through a Narrow Solid-State Nanopore at High Voltage: Experiments and Theory

(2012) Benjamin Cressiot et al.   ACS Nano

Using a nanopore for single molecule detection and single cell transfection

(2012) Edward M. Nelson et al.   ANALYST

DNA Base-Calling from a Nanopore Using a Viterbi Algorithm

(2012) Winston Timp et al.   BIOPHYSICAL JOURNAL

Slowing down DNA translocation through a nanopore by lowering fluid temperature

(2012) Li-Hsien Yeh et al.   ELECTROPHORESIS

An integrated encyclopedia of DNA elements in the human genome

(2012)   NATURE

Hybrid error correction and de novo assembly of single-molecule sequencing reads

(2012) Sergey Koren et al.   NATURE BIOTECHNOLOGY

Reading DNA at single-nucleotide resolution with a mutant MspA nanopore and phi29 DNA polymerase

(2012) Elizabeth A Manrao et al.   NATURE BIOTECHNOLOGY

Automated forward and reverse ratcheting of DNA in a nanopore at 5-Å precision

(2012) Gerald M Cherf et al.   NATURE BIOTECHNOLOGY

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Stochastic sensing of proteins with receptor-modified solid-state nanopores

(2012) Ruoshan Wei et al.   Nature Nanotechnology

Next-generation proteomics: towards an integrative view of proteome dynamics

(2012) A. F. Maarten Altelaar et al.   NATURE REVIEWS GENETICS

Dynamic Control of Nanoprecipitation in a Nanopipette

(2011) Boaz Vilozny et al.   ACS Nano

Streptavidin and its biotin complex at atomic resolution

(2011) Isolde Le Trong et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Chemical, Thermal, and Electric Field Induced Unfolding of Single Protein Molecules Studied Using Nanopores

(2011) Kevin J. Freedman et al.   ANALYTICAL CHEMISTRY

Adaptive seeds tame genomic sequence comparison

(2011) S. M. Kielbasa et al.   GENOME RESEARCH

Controllability of complex networks

(2011) Yang-Yu Liu et al.   NATURE

Nanopore sensors for nucleic acid analysis

(2011) Bala Murali Venkatesan et al.   Nature Nanotechnology

Controlling protein translocation through nanopores with bio-inspired fluid walls

(2011) Erik C. Yusko et al.   Nature Nanotechnology

Applications of nanopipettes in the analytical sciences

(2010) Celeste A. Morris et al.   ANALYST

Beyond directed evolution—semi-rational protein engineering and design

(2010) Stefan Lutz   CURRENT OPINION IN BIOTECHNOLOGY

Nanopore Sequencing: Electrical Measurements of the Code of Life

(2010) Winston Timp et al.   IEEE TRANSACTIONS ON NANOTECHNOLOGY

Single-Molecule Observation of Protein Adsorption onto an Inorganic Surface

(2010) David J. Niedzwiecki et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Comparison of Scanning Ion Conductance Microscopy with Atomic Force Microscopy for Cell Imaging

(2010) Johannes Rheinlaender et al.   LANGMUIR

Detecting DNA Folding with Nanocapillaries

(2010) Lorenz J. Steinbock et al.   NANO LETTERS

Slowing the translocation of double-stranded DNA using a nanopore smaller than the double helix

(2010) Utkur Mirsaidov et al.   NANOTECHNOLOGY

Identifying single bases in a DNA oligomer with electron tunnelling

(2010) Shuo Huang et al.   Nature Nanotechnology

A flexible and efficient template format for circular consensus sequencing and SNP detection

(2010) K. J. Travers et al.   NUCLEIC ACIDS RESEARCH

Base-By-Base Ratcheting of Single Stranded DNA through a Solid-State Nanopore

(2010) Binquan Luan et al.   PHYSICAL REVIEW LETTERS

A Silica Nanochannel and Its Applications in Sensing and Molecular Transport

(2009) Bo Zhang et al.   ANALYTICAL CHEMISTRY

Multiple Base-Recognition Sites in a Biological Nanopore: Two Heads are Better than One

(2009) David Stoddart et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Engineered voltage-responsive nanopores

(2009) Zuzanna S. Siwy et al.   CHEMICAL SOCIETY REVIEWS

Single-Molecule Protein Unfolding in Solid State Nanopores

(2009) David S. Talaga et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Nanoscale live-cell imaging using hopping probe ion conductance microscopy

(2009) Pavel Novak et al.   NATURE METHODS

A census of human transcription factors: function, expression and evolution

(2009) Juan M. Vaquerizas et al.   NATURE REVIEWS GENETICS

Analyzing the forces binding a restriction endonuclease to DNA using a synthetic nanopore

(2009) B. Dorvel et al.   NUCLEIC ACIDS RESEARCH

Label-free biosensing with functionalized nanopipette probes

(2009) S. Umehara et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Interrogating single proteins through nanopores: challenges and opportunities

(2009) Liviu Movileanu   TRENDS IN BIOTECHNOLOGY

Ion Current Rectification at Nanopores in Glass Membranes

(2008) Henry S. White et al.   LANGMUIR

The potential and challenges of nanopore sequencing

(2008) Daniel Branton et al.   NATURE BIOTECHNOLOGY

The impact of next-generation sequencing technology on genetics

(2008) Elaine R. Mardis   TRENDS IN GENETICS

Bioinformatics challenges of new sequencing technology

(2008) Mihai Pop et al.   TRENDS IN GENETICS

Detection of DNA Sequences Using an Alternating Electric Field in a Nanopore Capacitor

(2007) Grigori Sigalov et al.   NANO LETTERS