A Gene-By-Gene Approach to Bacterial Population Genomics: Whole Genome MLST of Campylobacter

BIGSdb: Scalable analysis of bacterial genome variation at the population level

(2011) Keith A Jolley et al.   BMC BIOINFORMATICS

Niche segregation and genetic structure of Campylobacter jejuni populations from wild and agricultural host species

(2011) SAMUEL K. SHEPPARD et al.   MOLECULAR ECOLOGY

Whole-Genome Comparison of Two Campylobacter jejuni Isolates of the Same Sequence Type Reveals Multiple Loci of Different Ancestral Lineage

(2011) Patrick J. Biggs et al.   PLoS One

L-Fucose utilization provides Campylobacter jejuni with a competitive advantage

(2011) M. Stahl et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Rapid Pneumococcal Evolution in Response to Clinical Interventions

(2011) N. J. Croucher et al.   SCIENCE

Host Association of Campylobacter Genotypes Transcends Geographic Variation

(2010) S. K. Sheppard et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Multilocus sequence types of Finnish bovine Campylobacter jejuni isolates and their attribution to human infections

(2010) Caroline PA de Haan et al.   BMC MICROBIOLOGY

Evolutionary Dynamics of Complete Campylobacter Pan-Genomes and the Bacterial Species Concept

(2010) Tristan Lefébure et al.   Genome Biology and Evolution

Food-borne diseases — The challenges of 20years ago still persist while new ones continue to emerge

(2010) Diane G. Newell et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

The growing UK epidemic of human campylobacteriosis

(2010) Norval JC Strachan et al.   LANCET

Yersinia pestis genome sequencing identifies patterns of global phylogenetic diversity

(2010) Giovanna Morelli et al.   NATURE GENETICS

progressiveMauve: Multiple Genome Alignment with Gene Gain, Loss and Rearrangement

(2010) Aaron E. Darling et al.   PLoS One

Evolution of an Agriculture-Associated Disease Causing Campylobacter coli Clade: Evidence from National Surveillance Data in Scotland

(2010) Samuel K. Sheppard et al.   PLoS One

Evolution of MRSA During Hospital Transmission and Intercontinental Spread

(2010) S. R. Harris et al.   SCIENCE

Impact of recombination on bacterial evolution

(2010) Xavier Didelot et al.   TRENDS IN MICROBIOLOGY

CampylobacterGenotyping to Determine the Source of Human Infection

(2009) Samuel K. Sheppard et al.   CLINICAL INFECTIOUS DISEASES

Assigning the source of human campylobacteriosis in New Zealand: A comparative genetic and epidemiological approach

(2009) Petra Mullner et al.   INFECTION GENETICS AND EVOLUTION

Phylogenetic understanding of clonal populations in an era of whole genome sequencing

(2009) Talima Pearson et al.   INFECTION GENETICS AND EVOLUTION

Genomic Insights into the Convergence and Pathogenicity Factors of Campylobacter jejuni and Campylobacter coli Species

(2009) A. Caro-Quintero et al.   JOURNAL OF BACTERIOLOGY

Attribution ofCampylobacterInfections in Northeast Scotland to Specific Sources by Use of Multilocus Sequence Typing

(2009) Norval J. C. Strachan et al.   JOURNAL OF INFECTIOUS DISEASES

Genetic diversity and stability of the porA allele as a genetic marker in human Campylobacter infection

(2009) A. J. Cody et al.   MICROBIOLOGY-SGM

The Genomes On Line Database (GOLD) in 2009: status of genomic and metagenomic projects and their associated metadata

(2009) Konstantinos Liolios et al.   NUCLEIC ACIDS RESEARCH

Toward the Use of Genomics to Study Microevolutionary Change in Bacteria

(2009) Daniel Falush   PLoS Genetics

Comparative genomic assessment of Multi-Locus Sequence Typing: rapid accumulation of genomic heterogeneity among clonal isolates of Campylobacter jejuni

(2008) Eduardo N Taboada et al.   BMC EVOLUTIONARY BIOLOGY

Comparative genomics: the bacterial pan-genome

(2008) Hervé Tettelin et al.   CURRENT OPINION IN MICROBIOLOGY

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

(2008) D. R. Zerbino et al.   GENOME RESEARCH

Rapid Evolution and the Importance of Recombination to the Gastroenteric Pathogen Campylobacter jejuni

(2008) D. J. Wilson et al.   MOLECULAR BIOLOGY AND EVOLUTION

Comparative Genomic Analysis of Clinical Strains of Campylobacter jejuni from South Africa

(2008) Beatriz Quiñones et al.   PLoS One

Convergence of Campylobacter Species: Implications for Bacterial Evolution

(2008) S. K. Sheppard et al.   SCIENCE

Tracing the Source of Campylobacteriosis

(2008) Daniel J. Wilson et al.   PLoS Genetics