Bayesian phylogeny of sucrose transporters: ancient origins, differential expansion and convergent evolution in monocots and dicots

PLncDB: plant long non-coding RNA database

(2013) J. Jin et al.   BIOINFORMATICS

Understanding and manipulating sucrose phloem loading, unloading, metabolism, and signalling to enhance crop yield and food security

(2013) D. M. Braun et al.   JOURNAL OF EXPERIMENTAL BOTANY

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

UniVIO: A Multiple Omics Database with Hormonome and Transcriptome Data from Rice

(2013) Toru Kudo et al.   PLANT AND CELL PHYSIOLOGY

The Mitochondrial Genome of Soybean Reveals Complex Genome Structures and Gene Evolution at Intercellular and Phylogenetic Levels

(2013) Shengxin Chang et al.   PLoS One

The Amborella Genome and the Evolution of Flowering Plants

(2013) et al.   SCIENCE

Photoperiodic regulation of the sucrose transporter StSUT4 affects the expression of circadian-regulated genes and ethylene production

(2013) Izabela Chincinska et al.   Frontiers in Plant Science

The Medicago truncatula Sucrose Transporter Family: Characterization and Implication of Key Members in Carbon Partitioning towards Arbuscular Mycorrhizal Fungi

(2012) Joan Doidy et al.   Molecular Plant

The banana (Musa acuminata) genome and the evolution of monocotyledonous plants

(2012) Angélique D’Hont et al.   NATURE

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

(2012) Cole Trapnell et al.   Nature Protocols

Rfam 11.0: 10 years of RNA families

(2012) Sarah W. Burge et al.   NUCLEIC ACIDS RESEARCH

PGDD: a database of gene and genome duplication in plants

(2012) Tae-Ho Lee et al.   NUCLEIC ACIDS RESEARCH

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

MicroRNA profiles and their control of male gametophyte development in rice

(2012) Hua Peng et al.   PLANT MOLECULAR BIOLOGY

The Tonoplast-Localized Sucrose Transporter in Populus (PtaSUT4) Regulates Whole-Plant Water Relations, Responses to Water Stress, and Photosynthesis

(2012) Christopher J. Frost et al.   PLoS One

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

(2012) Fredrik Ronquist et al.   SYSTEMATIC BIOLOGY

SUT Sucrose and MST Monosaccharide Transporter Inventory of the Selaginella Genome

(2012) Sylvie Lalonde et al.   Frontiers in Plant Science

Evolution of plant sucrose uptake transporters

(2012) Anke Reinders   Frontiers in Plant Science

Transcript profiling reveals expression differences in wild-type and glabrous soybean lines

(2011) Matt Hunt et al.   BMC PLANT BIOLOGY

RNA-Seq Analysis of a Soybean Near-Isogenic Line Carrying Bacterial Leaf Pustule-Resistant and -Susceptible Alleles

(2011) K. H. Kim et al.   DNA RESEARCH

Arabidopsis SUC1 loads the phloem in suc2 mutants when expressed from the SUC2 promoter

(2011) Kathrin Wippel et al.   JOURNAL OF EXPERIMENTAL BOTANY

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Membrane-Transport Systems for Sucrose in Relation to Whole-Plant Carbon Partitioning

(2011) Brian G. Ayre   Molecular Plant

De novo genome sequencing and comparative genomics of date palm (Phoenix dactylifera)

(2011) Eman K Al-Dous et al.   NATURE BIOTECHNOLOGY

Vacuoles release sucrose via tonoplast-localised SUC4-type transporters

(2011) S. Schneider et al.   PLANT BIOLOGY

Impaired Function of the Tonoplast-Localized Sucrose Transporter in Rice, OsSUT2 , Limits the Transport of Vacuolar Reserve Sucrose and Affects Plant Growth

(2011) Joon-Seob Eom et al.   PLANT PHYSIOLOGY

MACSE: Multiple Alignment of Coding SEquences Accounting for Frameshifts and Stop Codons

(2011) Vincent Ranwez et al.   PLoS One

SolexaQA: At-a-glance quality assessment of Illumina second-generation sequencing data

(2010) Murray P Cox et al.   BMC BIOINFORMATICS

Sucrose transporters of higher plants

(2010) Christina Kühn et al.   CURRENT OPINION IN PLANT BIOLOGY

Genome sequence of the palaeopolyploid soybean

(2010) Jeremy Schmutz et al.   NATURE

Evolution of development of vascular cambia and secondary growth

(2010) Rachel Spicer et al.   NEW PHYTOLOGIST

Rice Expression Atlas In Reproductive Development

(2010) Masahiro Fujita et al.   PLANT AND CELL PHYSIOLOGY

The sucrose transporter family in Populus: the importance of a tonoplast PtaSUT4 to biomass and carbon partitioning

(2010) Raja S. Payyavula et al.   PLANT JOURNAL

Aquilegia: A New Model for Plant Development, Ecology, and Evolution

(2009) Elena M. Kramer   Annual Review of Plant Biology

Sucrose transporter1 functions in phloem loading in maize leaves

(2009) Thomas L. Slewinski et al.   JOURNAL OF EXPERIMENTAL BOTANY

A dynamic gene expression atlas covering the entire life cycle of rice

(2009) Lei Wang et al.   PLANT JOURNAL

Genetic Control of Carbon Partitioning in Grasses: Roles of Sucrose Transporters and Tie-dyed Loci in Phloem Loading

(2009) D. M. Braun et al.   PLANT PHYSIOLOGY

Angiosperm genome comparisons reveal early polyploidy in the monocot lineage

(2009) H. Tang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Penetration of the Stigma and Style Elicits a Novel Transcriptome in Pollen Tubes, Pointing to Genes Critical for Growth in a Pistil

(2009) Yuan Qin et al.   PLoS Genetics

Evolution of developmental mechanisms in plants

(2008) Jane A Langdale   CURRENT OPINION IN GENETICS & DEVELOPMENT

Phylogeny.fr: robust phylogenetic analysis for the non-specialist

(2008) A. Dereeper et al.   NUCLEIC ACIDS RESEARCH

Functional Characterization of the Arabidopsis AtSUC2 Sucrose/H+ Symporter by Tissue-Specific Complementation Reveals an Essential Role in Phloem Loading But Not in Long-Distance Transport

(2008) A. C. Srivastava et al.   PLANT PHYSIOLOGY