The rhizosphere microbiota of plant invaders: an overview of recent advances in the microbiomics of invasive plants

Soil fungi rather than bacteria were modified by invasive plants, and that benefited invasive plant growth

(2014) Hai Feng Xiao et al.   PLANT AND SOIL

Bacterial endophytes enhance competition by invasive plants

(2013) Marnie E. Rout et al.   AMERICAN JOURNAL OF BOTANY

Soil disturbances can suppress the invasion of alien plants under plant–soil feedback

(2013) Yuya Fukano et al.   ECOLOGICAL MODELLING

Comparative metatranscriptomics reveals kingdom level changes in the rhizosphere microbiome of plants

(2013) Thomas R Turner et al.   ISME Journal

Amplicon pyrosequencing reveals the soil microbial diversity associated with invasive Japanese barberry (Berberis thunbergiiDC.)

(2013) V. C. Coats et al.   MOLECULAR ECOLOGY

Going back to the roots: the microbial ecology of the rhizosphere

(2013) Laurent Philippot et al.   NATURE REVIEWS MICROBIOLOGY

Can Global Weed Assemblages Be Used to Predict Future Weeds?

(2013) Louise Morin et al.   PLoS One

Life on Human Surfaces: Skin Metagenomics

(2013) Alban Mathieu et al.   PLoS One

Animals in a bacterial world, a new imperative for the life sciences

(2013) Margaret McFall-Ngai et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Plant–soil biota interactions of an invasive species in its native and introduced ranges: Implications for invasion success

(2013) Qiang Yang et al.   SOIL BIOLOGY & BIOCHEMISTRY

Metagenomic identification of viral pathogens

(2013) Kyle Bibby   TRENDS IN BIOTECHNOLOGY

Soil pathogen communities associated with native and non-nativePhragmites australispopulations in freshwater wetlands

(2013) Eric B. Nelson et al.   Ecology and Evolution

The rhizosphere revisited: root microbiomics

(2013) Peter A. H. M. Bakker et al.   Frontiers in Plant Science

Interactions between exotic invasive plants and soil microbes in the rhizosphere suggest that ‘everything is not everywhere’

(2012) Marnie E. Rout et al.   ANNALS OF BOTANY

Microbial Population and Community Dynamics on Plant Roots and Their Feedbacks on Plant Communities

(2012) James D. Bever et al.   Annual Review of Microbiology

Manipulating the soil microbiome to increase soil health and plant fertility

(2012) Jacqueline M. Chaparro et al.   BIOLOGY AND FERTILITY OF SOILS

Front-runners in plant–microbe interactions

(2012) Pamela C Ronald et al.   CURRENT OPINION IN PLANT BIOLOGY

Application of targeted metagenomics to explore abundance and diversity of CO2-fixing bacterial community using cbbL gene from the rhizosphere of Arachis hypogaea

(2012) Basit Yousuf et al.   GENE

Microbes as Targets and Mediators of Allelopathy in Plants

(2012) Don Cipollini et al.   JOURNAL OF CHEMICAL ECOLOGY

Volatile Mediated Interactions Between Bacteria and Fungi in the Soil

(2012) Uta Effmert et al.   JOURNAL OF CHEMICAL ECOLOGY

Enhanced allelopathy and competitive ability of invasive plant Solidago canadensis in its introduced range

(2012) Yongge Yuan et al.   Journal of Plant Ecology

Microbial-mediated feedbacks of leaf litter on invasive plant growth and interspecific competition

(2012) Kenneth J. Elgersma et al.   PLANT AND SOIL

Novel techniques and findings in the study of plant microbiota: Search for plant probiotics

(2012) Aleš Berlec   PLANT SCIENCE

A Drought Resistance-Promoting Microbiome Is Selected by Root System under Desert Farming

(2012) Ramona Marasco et al.   PLoS One

Coevolution between invasive and native plants driven by chemical competition and soil biota

(2012) R. A. Lankau   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Impacts of biological invasions: what's what and the way forward

(2012) Daniel Simberloff et al.   TRENDS IN ECOLOGY & EVOLUTION

The rhizosphere microbiome and plant health

(2012) Roeland L. Berendsen et al.   TRENDS IN PLANT SCIENCE

Impact of root exudates and plant defense signaling on bacterial communities in the rhizosphere. A review

(2011) Rogier F. Doornbos et al.   Agronomy for Sustainable Development

A global assessment of invasive plant impacts on resident species, communities and ecosystems: the interaction of impact measures, invading species' traits and environment

(2011) Petr Pyšek et al.   GLOBAL CHANGE BIOLOGY

Legacy effects overwhelm the short-term effects of exotic plant invasion and restoration on soil microbial community structure, enzyme activities, and nitrogen cycling

(2011) Kenneth J. Elgersma et al.   OECOLOGIA

Plant-induced changes in soil nutrient dynamics by native and invasive grass species

(2011) Lora B. Perkins et al.   PLANT AND SOIL

The symbiosis with arbuscular mycorrhizal fungi contributes to plant tolerance to serpentine edaphic stress

(2011) Pavla Doubková et al.   SOIL BIOLOGY & BIOCHEMISTRY

Why research on traits of invasive plants tells us very little

(2011) Ken Thompson et al.   TRENDS IN ECOLOGY & EVOLUTION

The ecosystem and evolutionary contexts of allelopathy

(2011) Inderjit et al.   TRENDS IN ECOLOGY & EVOLUTION

The Earth Microbiome Project: Meeting report of the “1st EMP meeting on sample selection and acquisition” at Argonne National Laboratory October 6th 2010.

(2011) Jack A. Gilbert et al.   Standards in Genomic Sciences

Grand Challenges in Terrestrial Microbiology

(2011) Lisa Y. Stein et al.   Frontiers in Microbiology

Metagenomic Analyses: Past and Future Trends

(2010) Carola Simon et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

A review of molecular methods to study the microbiota of soil and the mycosphere

(2010) J.D. van Elsas et al.   EUROPEAN JOURNAL OF SOIL BIOLOGY

Are root exudates more important than other sources of rhizodeposits in structuring rhizosphere bacterial communities?

(2010) Paul G. Dennis et al.   FEMS MICROBIOLOGY ECOLOGY

Use of plant growth-promoting rhizobacteria to control stress responses of plant roots

(2010) Bin Goo Kang et al.   Plant Biotechnology Reports

The interactive effects of plant microbial symbionts: a review and meta-analysis

(2010) Anna L. Larimer et al.   SYMBIOSIS

How symbiogenic is evolution?

(2010) Francisco Carrapiço   THEORY IN BIOSCIENCES

Helping plants to deal with insects: the role of beneficial soil-borne microbes

(2010) Ana Pineda et al.   TRENDS IN PLANT SCIENCE

Mutualistic mycorrhiza-like symbiosis in the most ancient group of land plants

(2010) Claire P. Humphreys et al.   Nature Communications

A Primer on Metagenomics

(2010) John C. Wooley et al.   PLoS Computational Biology

Mycorrhizal Symbioses and Plant Invasions

(2009) Anne Pringle et al.   Annual Review of Ecology Evolution and Systematics

Plant-Growth-Promoting Rhizobacteria

(2009) Ben Lugtenberg et al.   Annual Review of Microbiology

RNA-seq: from technology to biology

(2009) Samuel Marguerat et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

Rhizosphere chemical dialogues: plant–microbe interactions

(2009) Dayakar V Badri et al.   CURRENT OPINION IN BIOTECHNOLOGY

Symbioses: A Key Driver of Insect Physiological Processes, Ecological Interactions, Evolutionary Diversification, and Impacts on Humans

(2009) K. D. Klepzig et al.   ENVIRONMENTAL ENTOMOLOGY

Sequencing technologies — the next generation

(2009) Michael L. Metzker   NATURE REVIEWS GENETICS

Rhizosphere microbiota interfers with plant-plant interactions

(2009) A. Sanon et al.   PLANT AND SOIL

Plant-microbe-soil interactions in the rhizosphere: an evolutionary perspective

(2009) Hans Lambers et al.   PLANT AND SOIL

The rhizosphere zoo: An overview of plant-associated communities of microorganisms, including phages, bacteria, archaea, and fungi, and of some of their structuring factors

(2009) M. Buée et al.   PLANT AND SOIL

Carbon flow in the rhizosphere: carbon trading at the soil–root interface

(2009) D. L. Jones et al.   PLANT AND SOIL

Acquisition of phosphorus and nitrogen in the rhizosphere and plant growth promotion by microorganisms

(2009) Alan E. Richardson et al.   PLANT AND SOIL

Plant-rhizobacteria interactions alleviate abiotic stress conditions

(2009) CHRISTIAN DIMKPA et al.   PLANT CELL AND ENVIRONMENT

Species-driven changes in nitrogen cycling can provide a mechanism for plant invasions

(2009) R. Laungani et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Synergy between pathogen release and resource availability in plant invasion

(2009) D. Blumenthal et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Acceleration of Exotic Plant Invasion in a Forested Ecosystem by a Generalist Herbivore

(2008) ANNE K. ESCHTRUTH et al.   CONSERVATION BIOLOGY

Plant immune responses triggered by beneficial microbes

(2008) Saskia CM Van Wees et al.   CURRENT OPINION IN PLANT BIOLOGY

NOVEL WEAPONS: INVASIVE PLANT SUPPRESSES FUNGAL MUTUALISTS IN AMERICA BUT NOT IN ITS NATIVE EUROPE

(2008) Ragan M. Callaway et al.   ECOLOGY

Metagenomics: Future of microbial gene mining

(2008) J. Vakhlu et al.   INDIAN JOURNAL OF MICROBIOLOGY

Stress tolerance in plants via habitat-adapted symbiosis

(2008) Rusty J Rodriguez et al.   ISME Journal

Assessing bacterial diversity in soil

(2008) Li Zhang et al.   JOURNAL OF SOILS AND SEDIMENTS

A Bioinformatician's Guide to Metagenomics

(2008) V. Kunin et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Metagenomics

(2008) Philip Hugenholtz et al.   NATURE

Arbuscular mycorrhiza: the mother of plant root endosymbioses

(2008) Martin Parniske   NATURE REVIEWS MICROBIOLOGY

Molecular communication in the rhizosphere

(2008) Denis Faure et al.   PLANT AND SOIL

Altered ecosystem carbon and nitrogen cycles by plant invasion: a meta-analysis

(2007) Chengzhang Liao et al.   NEW PHYTOLOGIST