Detoxification- and Immune-Related Transcriptomic Analysis of Gills from Bay Scallops (Argopecten irradians) in Response to Algal Toxin Okadaic Acid

An approach to the study of the immunity functions of bivalve haemocytes: Physiology and molecular aspects

(2017) Mario Alberto Burgos-Aceves et al.   FISH & SHELLFISH IMMUNOLOGY

Effects of algal toxin okadaic acid on the non-specific immune and antioxidant response of bay scallop ( Argopecten irradians )

(2017) Cheng Chi et al.   FISH & SHELLFISH IMMUNOLOGY

Transcriptional and biochemical analysis of antioxidant enzymes in the mussel Mytilus galloprovincialis during experimental exposures to the toxic dinoflagellate Prorocentrum lima

(2017) M.V. Prego-Faraldo et al.   MARINE ENVIRONMENTAL RESEARCH

Identification of the Spinal Expression Profile of Non-coding RNAs Involved in Neuropathic Pain Following Spared Nerve Injury by Sequence Analysis

(2017) Jun Zhou et al.   Frontiers in Molecular Neuroscience

Cytotoxicity, haemolymphatic parameters, and oxidative stress following exposure to sub-lethal concentrations of quaternium-15 in Mytilus galloprovincialis

(2016) Caterina Faggio et al.   AQUATIC TOXICOLOGY

Crassostrea gigas exposure to the dinoflagellate Prorocentrum lima: Histological and gene expression effects on the digestive gland

(2016) Reyna de Jesús Romero-Geraldo et al.   MARINE ENVIRONMENTAL RESEARCH

Marine Toxin Okadaic Acid Affects the Immune Function of Bay Scallop (Argopecten irradians)

(2016) Cheng Chi et al.   MOLECULES

Proteomic profile in Perna viridis after exposed to Prorocentrum lima, a dinoflagellate producing DSP toxins

(2015) Lu Huang et al.   ENVIRONMENTAL POLLUTION

RNA-seq based on transcriptome reveals differ genetic expressing in Chlamys farreri exposed to carcinogen PAHs

(2015) Qian Jin et al.   ENVIRONMENTAL TOXICOLOGY AND PHARMACOLOGY

The known and unknown sources of reactive oxygen and nitrogen species in haemocytes of marine bivalve molluscs

(2015) Ludovic Donaghy et al.   FISH & SHELLFISH IMMUNOLOGY

Exposure to toxic Alexandrium minutum activates the detoxifying and antioxidant systems in gills of the oyster Crassostrea gigas

(2015) Caroline Fabioux et al.   HARMFUL ALGAE

In Vitro Analysis of Early Genotoxic and Cytotoxic Effects of Okadaic Acid in Different Cell Types of the MusselMytilus galloprovincialis

(2015) María Verónica Prego-Faraldo et al.   JOURNAL OF TOXICOLOGY AND ENVIRONMENTAL HEALTH-PART A-CURRENT ISSUES

Deep sequencing of the scallop Chlamys farreri transcriptome response to tetrabromobisphenol A (TBBPA) stress

(2015) Fengxiao Hu et al.   Marine Genomics

High-Throughput Sequencing Technologies

(2015) Jason A. Reuter et al.   MOLECULAR CELL

Evaluation of okadaic acid, dinophysistoxin-1 and dinophysistoxin-2 toxicity on Neuro-2a, NG108-15 and MCF-7 cell lines

(2015) Lucia Soliño et al.   TOXICOLOGY IN VITRO

Unbiased high-throughput characterization of mussel transcriptomic responses to sublethal concentrations of the biotoxin okadaic acid

(2015) Victoria Suarez-Ulloa et al.   PeerJ

Metabolites analysis, metabolic enzyme activities and bioaccumulation in the clam Ruditapes philippinarum exposed to benzo[a]pyrene

(2014) Dong Liu et al.   ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY

Response of detoxification gene mRNA expression and selection of molecular biomarkers in the clam Ruditapes philippinarum exposed to benzo[a]pyrene

(2014) Dong Liu et al.   ENVIRONMENTAL POLLUTION

P-glycoprotein expression in Perna viridis after exposure to Prorocentrum lima, a dinoflagellate producing DSP toxins

(2014) Lu Huang et al.   FISH & SHELLFISH IMMUNOLOGY

Deep sequencing-based transcriptome profiling analysis of Chlamys farreri exposed to benzo[a]pyrene

(2014) Yuefeng Cai et al.   GENE

Effect of okadaic acid on carpet shell clam (Ruditapes decussatus) haemocytes by in vitro exposure and harmful algal bloom simulation assays

(2013) Maria Prado-Alvarez et al.   CELL BIOLOGY AND TOXICOLOGY

Sequencing-based gene network analysis provides a core set of gene resource for understanding thermal adaptation in Zhikong scallopChlamys farreri

(2013) X. Fu et al.   Molecular Ecology Resources

Reactive oxygen species are linked to the toxicity of the dinoflagellate Alexandrium spp. to protists

(2012) HS Flores et al.   AQUATIC MICROBIAL ECOLOGY

Deep sequencing-based transcriptome profiling analysis of Oryzias melastigma exposed to PFOS

(2012) Qiansheng Huang et al.   AQUATIC TOXICOLOGY

Application of the biomarker responses in scallop (Chlamys farreri) to assess metals and PAHs pollution in Jiaozhou Bay, China

(2012) Na Liu et al.   MARINE ENVIRONMENTAL RESEARCH

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Massively Parallel RNA Sequencing Identifies a Complex Immune Gene Repertoire in the lophotrochozoan Mytilus edulis

(2012) Eva E. R. Philipp et al.   PLoS One

Transcriptomic Responses to Salinity Stress in the Pacific Oyster Crassostrea gigas

(2012) Xuelin Zhao et al.   PLoS One

Molecular and biochemical biomarkers in environmental monitoring: A comparison of biotransformation and antioxidant defense systems in multiple tissues

(2011) Francesco Regoli et al.   AQUATIC TOXICOLOGY

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

Modulation of ROS/MAPK signaling pathways by okadaic acid leads to cell death via, mitochondrial mediated caspase-dependent mechanism

(2010) Jayaraj Ravindran et al.   APOPTOSIS

Mediterranean Mussel Gene Expression Profile Induced by Okadaic Acid Exposure

(2010) Chiara Manfrin et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Comparative Study of Various Immune Parameters in Three Bivalve Species during a Natural Bloom of Dinophysis acuminata in Santa Catarina Island, Brazil

(2010) Danielle Ferraz Mello et al.   Toxins

The methyl ester of okadaic acid is more potent than okadaic acid in disrupting the actin cytoskeleton and metabolism of primary cultured hepatocytes

(2009) Begoña Espiña et al.   BRITISH JOURNAL OF PHARMACOLOGY

The Sanger FASTQ file format for sequences with quality scores, and the Solexa/Illumina FASTQ variants

(2009) Peter J. A. Cock et al.   NUCLEIC ACIDS RESEARCH

Approaches to monitoring, control and management of harmful algal blooms (HABs)

(2009) Donald M. Anderson   OCEAN & COASTAL MANAGEMENT

The algal hepatoxoxin okadaic acid is a substrate for human cytochromes CYP3A4 and CYP3A5

(2009) Fujiang Guo et al.   TOXICON

RNA-seq: An assessment of technical reproducibility and comparison with gene expression arrays

(2008) J. C. Marioni et al.   GENOME RESEARCH