A Wide Extent of Inter-Strain Diversity in Virulent and Vaccine Strains of Alphaherpesviruses

First complete genome sequence of infectious laryngotracheitis virus

(2011) Sang-Won Lee et al.   BMC GENOMICS

CGG repeat in the FMR1 gene: size matters

(2011) R Willemsen et al.   CLINICAL GENETICS

Evaluation of High-Throughput Sequencing for Identifying Known and Unknown Viruses in Biological Samples

(2011) Justine Cheval et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Herpesvirus telomeric repeats facilitate genomic integration into host telomeres and mobilization of viral DNA during reactivation

(2011) Benedikt B. Kaufer et al.   JOURNAL OF EXPERIMENTAL MEDICINE

Discovery and initial analysis of novel viral genomes in the soybean cyst nematode

(2011) S. Bekal et al.   JOURNAL OF GENERAL VIROLOGY

Integrative genomics viewer

(2011) James T Robinson et al.   NATURE BIOTECHNOLOGY

Sequence-specific error profile of Illumina sequencers

(2011) Kensuke Nakamura et al.   NUCLEIC ACIDS RESEARCH

Breaking the 1000-gene barrier for Mimivirus using ultra-deep genome and transcriptome sequencing

(2011) Matthieu Legendre et al.   Virology Journal

Extensive Genome-Wide Variability of Human Cytomegalovirus in Congenitally Infected Infants

(2011) Nicholas Renzette et al.   PLoS Pathogens

Variable Tandem Repeats Accelerate Evolution of Coding and Regulatory Sequences

(2010) Rita Gemayel et al.   Annual Review of Genetics

Phenotypic and genotypic characterization of acyclovir-resistant clinical isolates of herpes simplex virus

(2010) A. Sauerbrei et al.   ANTIVIRAL RESEARCH

Epigenetic regulation of latent HSV-1 gene expression

(2010) David C. Bloom et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Characterization of pseudorabies virus of wild boar origin from Europe

(2010) T. MÜLLER et al.   EPIDEMIOLOGY AND INFECTION

Assembly of large genomes using second-generation sequencing

(2010) M. C. Schatz et al.   GENOME RESEARCH

Huntington's disease: From molecular basis to therapeutic advances

(2010) Sylvia Krobitsch et al.   INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY

Sequential mutations associated with adaptation of human cytomegalovirus to growth in cell culture

(2010) D. J. Dargan et al.   JOURNAL OF GENERAL VIROLOGY

Sequence Variability in Clinical and Laboratory Isolates of Herpes Simplex Virus 1 Reveals New Mutations

(2010) M. L. Szpara et al.   JOURNAL OF VIROLOGY

Random Transposon-Mediated Mutagenesis of the Essential Large Tegument Protein pUL36 of Pseudorabies Virus

(2010) B. S. Mohl et al.   JOURNAL OF VIROLOGY

Deep Sequencing Reveals Highly Complex Dynamics of Human Cytomegalovirus Genotypes in Transplant Patients over Time

(2010) I. Gorzer et al.   JOURNAL OF VIROLOGY

Crystal structure of the conserved herpesvirus fusion regulator complex gH–gL

(2010) Tirumala K Chowdary et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Crystal structure of the Epstein-Barr virus (EBV) glycoprotein H/glycoprotein L (gH/gL) complex

(2010) H. Matsuura et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Structure of a core fragment of glycoprotein H from pseudorabies virus in complex with antibody

(2010) M. Backovic et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Variation of Aujeszky's disease viruses in wild swine in USA

(2010) Edwin C. Hahn et al.   VETERINARY MICROBIOLOGY

Structure and sequence of the saimiriine herpesvirus 1 genome

(2010) Shaun Tyler et al.   VIROLOGY

Accumulation of attenuating mutations in varying proportions within a high passage very virulent plus strain of Gallid herpesvirus type 2

(2010) Stephen J. Spatz   VIRUS RESEARCH

CTCF Prevents the Epigenetic Drift of EBV Latency Promoter Qp

(2010) Italo Tempera et al.   PLoS Pathogens

Chromatin organization of gammaherpesvirus latent genomes

(2009) Italo Tempera et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Microsatellite repeat instability and neurological disease

(2009) Judith R. Brouwer et al.   BIOESSAYS

The Integrated Genome Browser: free software for distribution and exploration of genome-scale datasets

(2009) J. W. Nicol et al.   BIOINFORMATICS

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Similar distribution of simple sequence repeats in diverse completedHuman Immunodeficiency Virus Type 1genomes

(2009) Ming Chen et al.   FEBS LETTERS

Sensitive and accurate detection of copy number variants using read depth of coverage

(2009) S. Yoon et al.   GENOME RESEARCH

High-throughput sequence analysis of variants of human cytomegalovirus strains Towne and AD169

(2009) A. J. Bradley et al.   JOURNAL OF GENERAL VIROLOGY

Glycoprotein G from pseudorabies virus binds to chemokines with high affinity and inhibits their function

(2009) A. Viejo-Borbolla et al.   JOURNAL OF GENERAL VIROLOGY

Sequences of complete human cytomegalovirus genomes from infected cell cultures and clinical specimens

(2009) C. Cunningham et al.   JOURNAL OF GENERAL VIROLOGY

Vaccines and Microbicides Preventing HIV-1, HSV-2, and HPV Mucosal Transmission

(2009) Damjan S. Nikolic et al.   JOURNAL OF INVESTIGATIVE DERMATOLOGY

Detection of Novel Sequences Related to African Swine Fever Virus in Human Serum and Sewage

(2009) J. Loh et al.   JOURNAL OF VIROLOGY

Quaranfil, Johnston Atoll, and Lake Chad Viruses Are Novel Members of the Family Orthomyxoviridae

(2009) R. M. Presti et al.   JOURNAL OF VIROLOGY

Mutagenesis of Varicella-Zoster Virus Glycoprotein B: Putative Fusion Loop Residues Are Essential for Viral Replication, and the Furin Cleavage Motif Contributes to Pathogenesis in Skin Tissue In Vivo

(2009) S. L. Oliver et al.   JOURNAL OF VIROLOGY

Cell Cycle Control of Kaposi's Sarcoma-Associated Herpesvirus Latency Transcription by CTCF-Cohesin Interactions

(2009) H. Kang et al.   JOURNAL OF VIROLOGY

Computational methods for discovering structural variation with next-generation sequencing

(2009) Paul Medvedev et al.   NATURE METHODS

JASPAR 2010: the greatly expanded open-access database of transcription factor binding profiles

(2009) Elodie Portales-Casamar et al.   NUCLEIC ACIDS RESEARCH

Fluorescence-Based Monitoring of In Vivo Neural Activity Using a Circuit-Tracing Pseudorabies Virus

(2009) Andrea E. Granstedt et al.   PLoS One

Diversity and Complexity in DNA Recognition by Transcription Factors

(2009) G. Badis et al.   SCIENCE

Unstable Tandem Repeats in Promoters Confer Transcriptional Evolvability

(2009) M. D. Vinces et al.   SCIENCE

Immunization with HSV-1 glycoprotein C prevents immune evasion from complement and enhances the efficacy of an HSV-1 glycoprotein D subunit vaccine

(2009) Sita Awasthi et al.   VACCINE

Molecular epidemiology of Brazilian pseudorabies viral isolates

(2009) Antônio Augusto Fonseca et al.   VETERINARY MICROBIOLOGY

Deep sequencing analysis of RNAs from a grapevine showing Syrah decline symptoms reveals a multiple virus infection that includes a novel virus

(2009) M. Al Rwahnih et al.   VIROLOGY

Complete viral genome sequence and discovery of novel viruses by deep sequencing of small RNAs: A generic method for diagnosis, discovery and sequencing of viruses

(2009) Jan F. Kreuze et al.   VIROLOGY

The complete genome of klassevirus - a novel picornavirus in pediatric stool

(2009) Alexander L Greninger et al.   Virology Journal

A Herpesvirus Encoded Deubiquitinase Is a Novel Neuroinvasive Determinant

(2009) Joy I. Lee et al.   PLoS Pathogens

Evaluation of next generation sequencing platforms for population targeted sequencing studies

(2009) Olivier Harismendy et al.   GENOME BIOLOGY

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

Herpes Simplex: Insights on Pathogenesis and Possible Vaccines

(2008) David M. Koelle et al.   Annual Review of Medicine

Phase I Dose-Escalation Study of a Monovalent Heat Shock Protein 70-Herpes Simplex Virus Type 2 (HSV-2) Peptide-Based Vaccine Designed To Prime or Boost CD8 T-Cell Responses in HSV-Naive and HSV-2-Infected Subjects

(2008) D. M. Koelle et al.   Clinical and Vaccine Immunology

Cohesins localize with CTCF at the KSHV latency control region and at cellular c-myc and H19/Igf2 insulators

(2008) William Stedman et al.   EMBO JOURNAL

Utilization of Microsatellite Polymorphism for Differentiating Herpes Simplex Virus Type 1 Strains

(2008) C. Deback et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Mutagenesis of the Active-Site Cysteine in the Ubiquitin-Specific Protease Contained in Large Tegument Protein pUL36 of Pseudorabies Virus Impairs Viral Replication In Vitro and Neuroinvasion In Vivo

(2008) S. Bottcher et al.   JOURNAL OF VIROLOGY

Repair of the UL21 Locus in Pseudorabies Virus Bartha Enhances the Kinetics of Retrograde, Transneuronal Infection In Vitro and In Vivo

(2008) D. Curanovic et al.   JOURNAL OF VIROLOGY

Comparative Genomics and Molecular Dynamics of DNA Repeats in Eukaryotes

(2008) G.-F. Richard et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Accurate whole human genome sequencing using reversible terminator chemistry

(2008) David R. Bentley et al.   NATURE

Substantial biases in ultra-short read data sets from high-throughput DNA sequencing

(2008) J. C. Dohm et al.   NUCLEIC ACIDS RESEARCH

A genome-wide view of the spectrum of spontaneous mutations in yeast

(2008) M. Lynch et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The alpha-herpesviruses: molecular pathfinders in nervous system circuits

(2008) Mats I. Ekstrand et al.   TRENDS IN MOLECULAR MEDICINE

An HSV-1 gD mutant virus as an entry-impaired live virus vaccine

(2008) Sita Awasthi et al.   VACCINE

Sequence determination of a mildly virulent strain (CU-2) of Gallid herpesvirus type 2 using 454 pyrosequencing

(2008) Stephen J. Spatz et al.   VIRUS GENES