Copy Number Variation in the Horse Genome

Genome-wide copy number variant discovery in dogs using the CanineHD genotyping array

(2014) Anna-Maja Molin et al.   BMC GENOMICS

Reconstructing complex regions of genomes using long-read sequencing technology

(2014) J. Huddleston et al.   GENOME RESEARCH

Genome-Wide Detection of Copy Number Variations among Diverse Horse Breeds by Array CGH

(2014) Wei Wang et al.   PLoS One

Enhancing Genome-Wide Copy Number Variation Identification by High Density Array CGH Using Diverse Resources of Pig Breeds

(2014) Jiying Wang et al.   PLoS One

The challenges and importance of structural variation detection in livestock

(2014) Derek M. Bickhart et al.   Frontiers in Genetics

The CYP2C19 genotype does not impact the long-term prognosis of patients with coronary artery disease

(2013) Yong Peng et al.   ATHEROSCLEROSIS

Analysis of copy number variants by three detection algorithms and their association with body size in horses

(2013) Julia Metzger et al.   BMC GENOMICS

Comparative analysis of mammalian Y chromosomes illuminates ancestral structure and lineage-specific evolution

(2013) G. Li et al.   GENOME RESEARCH

Microsatellite Analysis of Genetic Diversity and Population Structure of Arabian Horse Populations

(2013) Anas Khanshour et al.   JOURNAL OF HEREDITY

Of marsupials and men: “Backdoor” dihydrotestosterone synthesis in male sexual differentiation

(2013) Anna Biason-Lauber et al.   MOLECULAR AND CELLULAR ENDOCRINOLOGY

Recalibrating Equus evolution using the genome sequence of an early Middle Pleistocene horse

(2013) Ludovic Orlando et al.   NATURE

Phenotypic impact of genomic structural variation: insights from and for human disease

(2013) Joachim Weischenfeldt et al.   NATURE REVIEWS GENETICS

Somatic Mutations, Allele Loss, and DNA Methylation of the Cub and Sushi Multiple Domains 1 (CSMD1) Gene Reveals Association with Early Age of Diagnosis in Colorectal Cancer Patients

(2013) Austin Y. Shull et al.   PLoS One

Genetic Diversity in the Modern Horse Illustrated from Genome-Wide SNP Data

(2013) Jessica L. Petersen et al.   PLoS One

Genome-Wide Analysis Reveals Selection for Important Traits in Domestic Horse Breeds

(2013) Jessica L. Petersen et al.   PLoS Genetics

Copy number variation in the genomes of domestic animals

(2012) A. Clop et al.   ANIMAL GENETICS

Detection of copy number variants in the horse genome and examination of their association with recurrent laryngeal neuropathy

(2012) M.C. Dupuis et al.   ANIMAL GENETICS

Identification of genome-wide copy number variations among diverse pig breeds by array CGH

(2012) Yan Li et al.   BMC GENOMICS

Whole-Genome sequencing and genetic variant analysis of a quarter Horse mare

(2012) Ryan Doan et al.   BMC GENOMICS

A genome-wide detection of copy number variations using SNP genotyping arrays in swine

(2012) Jiying Wang et al.   BMC GENOMICS

Copy number variation prevalence in known asthma genes and their impact on asthma susceptibility

(2012) A. J. Rogers et al.   CLINICAL AND EXPERIMENTAL ALLERGY

Backdoor pathway for dihydrotestosterone biosynthesis: Implications for normal and abnormal human sex development

(2012) Maki Fukami et al.   DEVELOPMENTAL DYNAMICS

Copy number analysis of 413 isolated talipes equinovarus patients suggests role for transcriptional regulators of early limb development

(2012) David M Alvarado et al.   EUROPEAN JOURNAL OF HUMAN GENETICS

Copy number variation in the cattle genome

(2012) George E. Liu et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Analysis of copy number variations in Holstein cows identify potential mechanisms contributing to differences in residual feed intake

(2012) Yali Hou et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Identification of copy number variants in horses

(2012) R. Doan et al.   GENOME RESEARCH

Copy number variation of individual cattle genomes using next-generation sequencing

(2012) D. M. Bickhart et al.   GENOME RESEARCH

Confirmation of association ofFCGR3Bbut notFCGR3Acopy number with susceptibility to autoantibody positive rheumatoid arthritis

(2012) James I. Robinson et al.   HUMAN MUTATION

Efficient typing of copy number variations in a segmental duplication-mediated rearrangement hotspot using multiplex competitive amplification

(2012) Renqian Du et al.   JOURNAL OF HUMAN GENETICS

Copy number variations in neurodevelopmental disorders

(2012) Hannah M. Grayton et al.   PROGRESS IN NEUROBIOLOGY

Exploring the role of copy number variants in human adaptation

(2012) Rebecca C. Iskow et al.   TRENDS IN GENETICS

Rare Copy Number Variants Contribute to Congenital Left-Sided Heart Disease

(2012) Marc-Phillip Hitz et al.   PLoS Genetics

A High Density SNP Array for the Domestic Horse and Extant Perissodactyla: Utility for Association Mapping, Genetic Diversity, and Phylogeny Studies

(2012) Molly E. McCue et al.   PLoS Genetics

Novel origins of copy number variation in the dog genome

(2012) Jonas Berglund et al.   GENOME BIOLOGY

Why Boys Will Be Boys: Two Pathways of Fetal Testicular Androgen Biosynthesis Are Needed for Male Sexual Differentiation

(2011) Christa E. Flück et al.   AMERICAN JOURNAL OF HUMAN GENETICS

A high-resolution integrated map of copy number polymorphisms within and between breeds of the modern domesticated dog

(2011) Thomas J Nicholas et al.   BMC GENOMICS

Relating CNVs to transcriptome data at fine resolution: Assessment of the effect of variant size, type, and overlap with functional regions

(2011) A. Schlattl et al.   GENOME RESEARCH

Copy number variation in the domestic dog

(2011) Carlos E. Alvarez et al.   MAMMALIAN GENOME

Mapping copy number variation by population-scale genome sequencing

(2011) Ryan E. Mills et al.   NATURE

Copy Number Variation in Patients with Disorders of Sex Development Due to 46,XY Gonadal Dysgenesis

(2011) Stefan White et al.   PLoS One

Copy Number Variants in Patients with Severe Oligozoospermia and Sertoli-Cell-Only Syndrome

(2011) Frank Tüttelmann et al.   PLoS One

A Gene Catalogue of the Euchromatic Male-Specific Region of the Horse Y Chromosome: Comparison with Human and Other Mammals

(2011) Nandina Paria et al.   PLoS One

Genome-Wide Mapping of Copy Number Variation in Humans: Comparative Analysis of High Resolution Array Platforms

(2011) Rajini R. Haraksingh et al.   PLoS One

GTG Mutation in the Start Codon of the Androgen Receptor Gene in a Family of Horses with 64,XY Disorder of Sex Development

(2011) T. Révay et al.   Sexual Development

The search for SNPs, CNVs, and epigenetic variants associated with the complex disease of male infertility

(2011) Douglas T. Carrell et al.   Systems Biology in Reproductive Medicine

Interspersed repeats in the horse (Equus caballus); spatial correlations highlight conserved chromosomal domains

(2010) D. L. Adelson et al.   ANIMAL GENETICS

A conserved segmental duplication within ELA

(2010) C. L. Brinkmeyer-Langford et al.   ANIMAL GENETICS

Molecular heterogeneity of XY sex reversal in horses

(2010) T. Raudsepp et al.   ANIMAL GENETICS

Structural Variation in the Human Genome and its Role in Disease

(2010) Paweł Stankiewicz et al.   Annual Review of Medicine

An initial comparative map of copy number variations in the goat (Capra hircus) genome

(2010) Luca Fontanesi et al.   BMC GENOMICS

An initial map of chromosomal segmental copy number variations in the chicken

(2010) Xiaofei Wang et al.   BMC GENOMICS

Analysis of copy number variations among diverse cattle breeds

(2010) G. E. Liu et al.   GENOME RESEARCH

A first comparative map of copy number variations in the sheep genome

(2010) L. Fontanesi et al.   GENOMICS

Genomic architecture of MHC-linked odorant receptor gene repertoires among 16 vertebrate species

(2010) Pablo Sandro Carvalho Santos et al.   IMMUNOGENETICS

Copy number variation and human genome maps

(2010) Steven A McCarroll   NATURE GENETICS

Identification of De Novo Copy Number Variants Associated with Human Disorders of Sexual Development

(2010) Mounia Tannour-Louet et al.   PLoS One

Copy Number Variants in Premature Ovarian Failure and Ovarian Dysgenesis

(2010) S. Ledig et al.   Sexual Development

Towards a comprehensive structural variation map of an individual human genome

(2010) Andy W Pang et al.   GENOME BIOLOGY

Human subtelomeric copy number variations

(2009) H. Riethman   CYTOGENETIC AND GENOME RESEARCH

CNVs and genetic medicine (excitement and consequences of a rediscovery)

(2009) J.S. Beckmann et al.   CYTOGENETIC AND GENOME RESEARCH

The genomic architecture of segmental duplications and associated copy number variants in dogs

(2009) T. J. Nicholas et al.   GENOME RESEARCH

Origins and functional impact of copy number variation in the human genome

(2009) Donald F. Conrad et al.   NATURE

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

(2009) Da Wei Huang et al.   Nature Protocols

Genome Sequence, Comparative Analysis, and Population Genetics of the Domestic Horse

(2009) C. M. Wade et al.   SCIENCE

Human olfaction: from genomic variation to phenotypic diversity

(2009) Yehudit Hasin-Brumshtein et al.   TRENDS IN GENETICS

Fine-mapping subtelomeric deletions and duplications by comparative genomic hybridization in 42 individuals

(2008) Cheryl DeScipio et al.   AMERICAN JOURNAL OF MEDICAL GENETICS PART A

Whole genome comparative studies between chicken and turkey and their implications for avian genome evolution

(2008) Darren K Griffin et al.   BMC GENOMICS

A 4,103 marker integrated physical and comparative map of the horse genome

(2008) T. Raudsepp et al.   CYTOGENETIC AND GENOME RESEARCH

Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists

(2008) Da Wei Huang et al.   NUCLEIC ACIDS RESEARCH

High-Resolution Copy-Number Variation Map Reflects Human Olfactory Receptor Diversity and Evolution

(2008) Yehudit Hasin et al.   PLoS Genetics