Phenotype Ontologies and Cross-Species Analysis for Translational Research

Genome-Wide Linkage Analyses of 12 Endophenotypes for Schizophrenia From the Consortium on the Genetics of Schizophrenia

(2013) Tiffany A. Greenwood et al.   AMERICAN JOURNAL OF PSYCHIATRY

FYPO: the fission yeast phenotype ontology

(2013) M. A. Harris et al.   BIOINFORMATICS

Genome-wide Generation and Systematic Phenotyping of Knockout Mice Reveals New Roles for Many Genes

(2013) Jacqueline K. White et al.   CELL

Deciphering the Mechanisms of Developmental Disorders (DMDD): a new programme for phenotyping embryonic lethal mice

(2013) T. Mohun et al.   Disease Models & Mechanisms

Improved exome prioritization of disease genes through cross-species phenotype comparison

(2013) P. N. Robinson et al.   GENOME RESEARCH

Identification of risk loci with shared effects on five major psychiatric disorders: a genome-wide analysis

(2013)   LANCET

Meeting report of the European mouse complex genetics network SYSGENET

(2013) Anna Delprato et al.   MAMMALIAN GENOME

Mental health: On the spectrum

(2013) David Adam   NATURE

A systematic genome-wide analysis of zebrafish protein-coding gene function

(2013) Ross N. W. Kettleborough et al.   NATURE

Manteia, a predictive data mining system for vertebrate genes and its applications to human genetic diseases

(2013) Olivier Tassy et al.   NUCLEIC ACIDS RESEARCH

FlyBase 102—advanced approaches to interrogating FlyBase

(2013) Susan E. St. Pierre et al.   NUCLEIC ACIDS RESEARCH

The Human Phenotype Ontology project: linking molecular biology and disease through phenotype data

(2013) Sebastian Köhler et al.   NUCLEIC ACIDS RESEARCH

Genomic responses in mouse models poorly mimic human inflammatory diseases

(2013) Junhee Seok et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Definition and description of schizophrenia in the DSM-5

(2013) Rajiv Tandon et al.   SCHIZOPHRENIA RESEARCH

PhenoMiner: quantitative phenotype curation at the rat genome database

(2013) Stanley J. F. Laulederkind et al.   Database-The Journal of Biological Databases and Curation

PhenoDigm: analyzing curated annotations to associate animal models with human diseases

(2013) D. Smedley et al.   Database-The Journal of Biological Databases and Curation

Network Topologies and Convergent Aetiologies Arising from Deletions and Duplications Observed in Individuals with Autism

(2013) Hyun Ji Noh et al.   PLoS Genetics

Toward knowledge support for analysis and interpretation of complex traits

(2013) Nigel Collier et al.   GENOME BIOLOGY

The Drosophila phenotype ontology

(2013) David Osumi-Sutherland et al.   Journal of Biomedical Semantics

The mouse pathology ontology, MPATH; structure and applications

(2013) Paul N Schofield et al.   Journal of Biomedical Semantics

Bayesian ontology querying for accurate and noise-tolerant semantic searches

(2012) S. Bauer et al.   BIOINFORMATICS

Disrupted Circadian Rhythms in a Mouse Model of Schizophrenia

(2012) Peter L. Oliver et al.   CURRENT BIOLOGY

Phenotypic overlap in the contribution of individual genes to CNV pathogenicity revealed by cross-species computational analysis of single-gene mutations in humans, mice and zebrafish

(2012) S. C. Doelken et al.   Disease Models & Mechanisms

Large-scale objective association of mouse phenotypes with human symptoms through structural variation identified in patients with developmental disorders

(2012) Hannah Boulding et al.   HUMAN MUTATION

Mouse genetic and phenotypic resources for human genetics

(2012) Paul N. Schofield et al.   HUMAN MUTATION

Deep phenotyping for precision medicine

(2012) Peter N. Robinson   HUMAN MUTATION

Accessing data from the International Mouse Phenotyping Consortium: state of the art and future plans

(2012) Ann-Marie Mallon et al.   MAMMALIAN GENOME

The International Mouse Phenotyping Consortium: past and future perspectives on mouse phenotyping

(2012) Steve D. M. Brown et al.   MAMMALIAN GENOME

Mouse large-scale phenotyping initiatives: overview of the European Mouse Disease Clinic (EUMODIC) and of the Wellcome Trust Sanger Institute Mouse Genetics Project

(2012) Abdel Ayadi et al.   MAMMALIAN GENOME

The Mammalian Phenotype Ontology as a unifying standard for experimental and high-throughput phenotyping data

(2012) Cynthia L. Smith et al.   MAMMALIAN GENOME

An affective disorder in zebrafish with mutation of the glucocorticoid receptor

(2012) L Ziv et al.   MOLECULAR PSYCHIATRY

Synaptic scaffold evolution generated components of vertebrate cognitive complexity

(2012) Jess Nithianantharajah et al.   NATURE NEUROSCIENCE

Brain-derived neurotrophic factor and glucocorticoids: Reciprocal influence on the central nervous system

(2012) T. Numakawa et al.   NEUROSCIENCE

The Mouse Genome Database: Genotypes, Phenotypes, and Models of Human Disease

(2012) C. J. Bult et al.   NUCLEIC ACIDS RESEARCH

ZFIN, the Zebrafish Model Organism Database: increased support for mutants and transgenics

(2012) Douglas G. Howe et al.   NUCLEIC ACIDS RESEARCH

Association Analysis of 94 Candidate Genes and Schizophrenia-Related Endophenotypes

(2012) Tiffany A. Greenwood et al.   PLoS One

Disease model curation improvements at Mouse Genome Informatics

(2012) S. M. Bello et al.   Database-The Journal of Biological Databases and Curation

Phenotype Ontology Research Coordination Network meeting report: creating a community network for comparing and leveraging phenotype-genotype knowledge across species

(2012) Paula Mabee et al.   Standards in Genomic Sciences

The Ortholog Conjecture Is Untestable by the Current Gene Ontology but Is Supported by RNA Sequencing Data

(2012) Xiaoshu Chen et al.   PLoS Computational Biology

Resolving the Ortholog Conjecture: Orthologs Tend to Be Weakly, but Significantly, More Similar in Function than Paralogs

(2012) Adrian M. Altenhoff et al.   PLoS Computational Biology

Uberon, an integrative multi-species anatomy ontology

(2012) Christopher J Mungall et al.   GENOME BIOLOGY

Worm Phenotype Ontology: Integrating phenotype data within and beyond the C. elegans community

(2011) Gary Schindelman et al.   BMC BIOINFORMATICS

A resource of vectors and ES cells for targeted deletion of microRNAs in mice

(2011) Haydn M Prosser et al.   NATURE BIOTECHNOLOGY

The Mouse Genome Database (MGD): comprehensive resource for genetics and genomics of the laboratory mouse

(2011) J. T. Eppig et al.   NUCLEIC ACIDS RESEARCH

PhenomeNET: a whole-phenome approach to disease gene discovery

(2011) R. Hoehndorf et al.   NUCLEIC ACIDS RESEARCH

The Kraepelinian dichotomy – going, going … but still not gone

(2010) Nick Craddock et al.   BRITISH JOURNAL OF PSYCHIATRY

The role of habituation in hippocampus-dependent spatial working memory tasks: Evidence from GluA1 AMPA receptor subunit knockout mice

(2010) David J. Sanderson et al.   HIPPOCAMPUS

Genes and biological processes commonly disrupted in rare and heterogeneous developmental delay syndromes

(2010) Tamim H. Shaikh et al.   HUMAN MOLECULAR GENETICS

Disrupted Activity in the Hippocampal–Accumbens Circuit of Type III Neuregulin 1 Mutant Mice

(2010) Malcolm W Nason et al.   NEUROPSYCHOPHARMACOLOGY

The Protein Ontology: a structured representation of protein forms and complexes

(2010) D. A. Natale et al.   NUCLEIC ACIDS RESEARCH

Systematic discovery of nonobvious human disease models through orthologous phenotypes

(2010) K. L. McGary et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Integrating phenotype ontologies across multiple species

(2010) Christopher J Mungall et al.   GENOME BIOLOGY

Association study of SNAP25 and schizophrenia in Irish family and case-control samples

(2009) A.H. Fanous et al.   AMERICAN JOURNAL OF MEDICAL GENETICS PART B-NEUROPSYCHIATRIC GENETICS

Common genetic determinants of schizophrenia and bipolar disorder in Swedish families: a population-based study

(2009) Paul Lichtenstein et al.   LANCET

The Gene Ontology in 2010: extensions and refinements

(2009)   NUCLEIC ACIDS RESEARCH

WormBase: a comprehensive resource for nematode research

(2009) Todd W. Harris et al.   NUCLEIC ACIDS RESEARCH

Linking Human Diseases to Animal Models Using Ontology-Based Phenotype Annotation

(2009) Nicole L. Washington et al.   PLOS BIOLOGY

Semantic Similarity in Biomedical Ontologies

(2009) Catia Pesquita et al.   PLoS Computational Biology

Forging Links between Human Mental Retardation–Associated CNVs and Mouse Gene Knockout Models

(2009) Caleb Webber et al.   PLoS Genetics

The Human Phenotype Ontology: A Tool for Annotating and Analyzing Human Hereditary Disease

(2008) Peter N. Robinson et al.   AMERICAN JOURNAL OF HUMAN GENETICS