Re-Ranking Sequencing Variants in the Post-GWAS Era for Accurate Causal Variant Identification

One thousand genomes imputation in the national cancer institute breast and prostate cancer cohort consortium aggressive prostate cancer genome-wide association study

(2012) Mitchell J. Machiela et al.   PROSTATE

Bayesian methods to overcome the winner’s curse in genetic studies

(2011) Lizhen Xu et al.   Annals of Applied Statistics

Association studies for next-generation sequencing

(2011) L. Luo et al.   GENOME RESEARCH

Low-coverage sequencing: Implications for design of complex trait association studies

(2011) Y. Li et al.   GENOME RESEARCH

Artifact due to differential error when cases and controls are imputed from different platforms

(2011) Jennifer A. Sinnott et al.   HUMAN GENETICS

BR-squared: a practical solution to the winner’s curse in genome-wide scans

(2011) Lei Sun et al.   HUMAN GENETICS

Fine mapping of a region of chromosome 11q13 reveals multiple independent loci associated with risk of prostate cancer

(2011) Charles C. Chung et al.   HUMAN MOLECULAR GENETICS

Genome-wide association study identifies new prostate cancer susceptibility loci

(2011) Fredrick R. Schumacher et al.   HUMAN MOLECULAR GENETICS

The long and winding road from correlation to causation

(2011) Michel Georges   NATURE GENETICS

Next-generation association studies for complex traits

(2011) Eleftheria Zeggini   NATURE GENETICS

A genome-wide association study in Chinese men identifies three risk loci for non-obstructive azoospermia

(2011) Zhibin Hu et al.   NATURE GENETICS

A rare variant in MYH6 is associated with high risk of sick sinus syndrome

(2011) Hilma Holm et al.   NATURE GENETICS

Needles in stacks of needles: finding disease-causal variants in a wealth of genomic data

(2011) Gregory M. Cooper et al.   NATURE REVIEWS GENETICS

Genotype and SNP calling from next-generation sequencing data

(2011) Rasmus Nielsen et al.   NATURE REVIEWS GENETICS

A flexible genome-wide bootstrap method that accounts for rankingand threshold-selection bias in GWAS interpretation and replication study design

(2011) Laura L. Faye et al.   STATISTICS IN MEDICINE

Leveraging Genetic Variability across Populations for the Identification of Causal Variants

(2010) Noah Zaitlen et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Evaluating the power to discriminate between highly correlated SNPs in genetic association studies

(2010) Miriam S. Udler et al.   GENETIC EPIDEMIOLOGY

Design of association studies with pooled or un-pooled next-generation sequencing data

(2010) Su Yeon Kim et al.   GENETIC EPIDEMIOLOGY

Imputation aware meta-analysis of genome-wide association studies

(2010) Noah Zaitlen et al.   GENETIC EPIDEMIOLOGY

MaCH: using sequence and genotype data to estimate haplotypes and unobserved genotypes

(2010) Yun Li et al.   GENETIC EPIDEMIOLOGY

Population genetic inference from genomic sequence variation

(2010) J. E. Pool et al.   GENOME RESEARCH

A map of human genome variation from population-scale sequencing

(2010) Richard M. Durbin et al.   NATURE

The Relationship between Imputation Error and Statistical Power in Genetic Association Studies in Diverse Populations

(2009) Lucy Huang et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Simultaneous Genotype Calling and Haplotype Phasing Improves Genotype Accuracy and Reduces False-Positive Associations for Genome-wide Association Studies

(2009) Brian L. Browning et al.   AMERICAN JOURNAL OF HUMAN GENETICS

A Unified Approach to Genotype Imputation and Haplotype-Phase Inference for Large Data Sets of Trios and Unrelated Individuals

(2009) Brian L. Browning et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Unbiased estimation of odds ratios: combining genomewide association scans with replication studies

(2009) Jack Bowden et al.   GENETIC EPIDEMIOLOGY

Quantifying and correcting for the winner's curse in genetic association studies

(2009) Rui Xiao et al.   GENETIC EPIDEMIOLOGY

Genomics: catch me if you can

(2009) Nathan Blow   NATURE METHODS

Validating, augmenting and refining genome-wide association signals

(2009) John P. A. Ioannidis et al.   NATURE REVIEWS GENETICS

Evaluation of next generation sequencing platforms for population targeted sequencing studies

(2009) Olivier Harismendy et al.   GENOME BIOLOGY

Simple and Efficient Analysis of Disease Association with Missing Genotype Data

(2008) D.Y. Lin et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Estimating Odds Ratios in Genome Scans: An Approximate Conditional Likelihood Approach

(2008) Arpita Ghosh et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Bias-reduced estimators and confidence intervals for odds ratios in genome-wide association studies

(2008) H. Zhong et al.   BIOSTATISTICS

Sequencing of natural strains of Arabidopsis thaliana with short reads

(2008) S. Ossowski et al.   GENOME RESEARCH

Genome-wide association scan identifies a colorectal cancer susceptibility locus on 11q23 and replicates risk loci at 8q24 and 18q21

(2008) Albert Tenesa et al.   NATURE GENETICS

Identification of loci associated with schizophrenia by genome-wide association and follow-up

(2008) Michael C O'Donovan et al.   NATURE GENETICS

Practical Issues in Imputation-Based Association Mapping

(2008) Yongtao Guan et al.   PLoS Genetics

Examining the statistical properties of fine-scale mapping in large-scale association studies

(2007) Steven Wiltshire et al.   GENETIC EPIDEMIOLOGY