Tunable Stochastic Pulsing in the Escherichia coli Multiple Antibiotic Resistance Network from Interlinked Positive and Negative Feedback Loops

Slow Protein Fluctuations Explain the Emergence of Growth Phenotypes and Persistence in Clonal Bacterial Populations

(2013) Andrea Rocco et al.   PLoS One

Dynamic Persistence of Antibiotic-Stressed Mycobacteria

(2013) Y. Wakamoto et al.   SCIENCE

Fitness of Escherichia coli strains carrying expressed and partially silent IncN and IncP1 plasmids

(2012) Bruce Humphrey et al.   BMC MICROBIOLOGY

Trade-offs between drug toxicity and benefit in the multi-antibiotic resistance system underlie optimal growth of E. coli

(2012) Kevin B Wood et al.   BMC Systems Biology

Transcriptional Cross Talk within themar-sox-robRegulon in Escherichia coli Is Limited to therobandmarRABOperons

(2012) Lon M. Chubiz et al.   JOURNAL OF BACTERIOLOGY

Contribution of the AcrAB-TolC Efflux Pump to High-Level Fluoroquinolone Resistance in Escherichia coli Isolated from Dogs and Humans

(2012) Toyotaka SATO et al.   JOURNAL OF VETERINARY MEDICAL SCIENCE

Estimating Fitness by Competition Assays between Drug Susceptible and Resistant Mycobacterium tuberculosis of Predominant Lineages in Mumbai, India

(2012) Purva Bhatter et al.   PLoS One

Pulsed Feedback Defers Cellular Differentiation

(2012) Joe H. Levine et al.   PLOS BIOLOGY

Superoxide dismutase C is required for intracellular survival and virulence of Burkholderia pseudomallei

(2011) M. Vanaporn et al.   MICROBIOLOGY-SGM

A sensing array of radically coupled genetic ‘biopixels’

(2011) Arthur Prindle et al.   NATURE

Stochastic Pulse Regulation in Bacterial Stress Response

(2011) J. C. W. Locke et al.   SCIENCE

Reversible and Noisy Progression towards a Commitment Point Enables Adaptable and Reliable Cellular Decision-Making

(2011) Anna Kuchina et al.   PLoS Computational Biology

Persister Cells

(2010) Kim Lewis   Annual Review of Microbiology

Aromatic Acid Metabolites of Escherichia coli K-12 Can Induce the marRAB Operon

(2010) L. M. Chubiz et al.   JOURNAL OF BACTERIOLOGY

A synchronized quorum of genetic clocks

(2010) Tal Danino et al.   NATURE

Interdependence of Cell Growth and Gene Expression: Origins and Consequences

(2010) M. Scott et al.   SCIENCE

Burkholderia Type VI Secretion Systems Have Distinct Roles in Eukaryotic and Bacterial Cell Interactions

(2010) Sandra Schwarz et al.   PLoS Pathogens

Growth Rate-Dependent Global Effects on Gene Expression in Bacteria

(2009) Stefan Klumpp et al.   CELL

Interlinking positive and negative feedback loops creates a tunable motif in gene regulatory networks

(2009) Xiao-Jun Tian et al.   PHYSICAL REVIEW E

Model of Transcriptional Activation by MarA in Escherichia coli

(2009) Michael E. Wall et al.   PLoS Computational Biology

Strong negative self regulation of Prokaryotic transcription factors increases the intrinsic noise of protein expression

(2008) Dov J Stekel et al.   BMC Systems Biology

Activation of the Escherichia coli marA/soxS/rob Regulon in Response to Transcriptional Activator Concentration

(2008) Robert G. Martin et al.   JOURNAL OF MOLECULAR BIOLOGY

Structural Insight on the Mechanism of Regulation of the MarR Family of Proteins: High-Resolution Crystal Structure of a Transcriptional Repressor from Methanobacterium thermoautotrophicum

(2008) Vivian Saridakis et al.   JOURNAL OF MOLECULAR BIOLOGY

Frequency-modulated nuclear localization bursts coordinate gene regulation

(2008) Long Cai et al.   NATURE

A fast, robust and tunable synthetic gene oscillator

(2008) Jesse Stricker et al.   NATURE

Robust, Tunable Biological Oscillations from Interlinked Positive and Negative Feedback Loops

(2008) T. Y.-C. Tsai et al.   SCIENCE

A Stochastic Single-Molecule Event Triggers Phenotype Switching of a Bacterial Cell

(2008) P. J. Choi et al.   SCIENCE