Functional Brachyury Binding Sites Establish a Temporal Read-out of Gene Expression in the Ciona Notochord

Tbx2/3 is an essential mediator within the Brachyury gene network during Ciona notochord development

(2013) D. S. Jose-Edwards et al.   DEVELOPMENT

Optimization of a Method for Chromatin Immunoprecipitation Assays in the Marine Invertebrate Chordate Ciona

(2013) Hitoshi Aihara et al.   MARINE BIOTECHNOLOGY

From Notochord Formation to Hereditary Chordoma: The Many Roles ofBrachyury

(2013) Yutaka Nibu et al.   Biomed Research International

In vivo knockdown of Brachyury results in skeletal defects and urorectal malformations resembling caudal regression syndrome

(2012) Tracie Pennimpede et al.   DEVELOPMENTAL BIOLOGY

An integrated functional genomics approach identifies the regulatory network directed by brachyury (T ) in chordoma

(2012) Andrew C Nelson et al.   JOURNAL OF PATHOLOGY

Genomic Targets of Brachyury (T) in Differentiating Mouse Embryonic Stem Cells

(2012) Amanda L. Evans et al.   PLoS One

DNA regions bound at low occupancy by transcription factors do not drive patterned reporter gene expression in Drosophila

(2012) W. W. Fisher et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Distinct cytoskeleton populations and extensive crosstalk control Ciona notochord tubulogenesis

(2011) B. Dong et al.   DEVELOPMENT

The identification of transcription factors expressed in the notochord of Ciona intestinalis adds new potential players to the brachyury gene regulatory network

(2011) Diana S. José-Edwards et al.   DEVELOPMENTAL DYNAMICS

Genomic cis-regulatory networks in the early Ciona intestinalis embryo

(2010) A. Kubo et al.   DEVELOPMENT

Brachyury-downstream gene sets in a chordate, Ciona intestinalis: integrating notochord specification, morphogenesis and chordate evolution

(2010) Kohji Hotta et al.   EVOLUTION & DEVELOPMENT

Ciona intestinalis Noto4 contains a phosphotyrosine interaction domain and is involved in the midline intercalation of notochord cells

(2010) Shigehiro Yamada et al.   INTERNATIONAL JOURNAL OF DEVELOPMENTAL BIOLOGY

Temporal regulation of the muscle gene cascade by Macho1 and Tbx6 transcription factors in Ciona intestinalis

(2010) J. E. Kugler et al.   JOURNAL OF CELL SCIENCE

The T-box transcription factor Brachyury promotes epithelial-mesenchymal transition in human tumor cells

(2010) Romaine I. Fernando et al.   JOURNAL OF CLINICAL INVESTIGATION

An inducible RNA interference system for the functional dissection of mouse embryogenesis

(2010) Joana A. Vidigal et al.   NUCLEIC ACIDS RESEARCH

Regulation of Notochord-Specific Expression ofCi-BraDownstream Genes inCiona intestinalisEmbryos

(2010) Hiroki Takahashi et al.   ZOOLOGICAL SCIENCE

Direct activation of a notochord cis-regulatory module by Brachyury and FoxA in the ascidian Ciona intestinalis

(2009) Y. J. Passamaneck et al.   DEVELOPMENT

Identification of direct T-box target genes in the developing zebrafish mesoderm

(2009) A. T. Garnett et al.   DEVELOPMENT

The evolutionarily conserved leprecan gene: Its regulation by Brachyury and its role in the developing Ciona notochord

(2009) Matthew P. Dunn et al.   DEVELOPMENTAL BIOLOGY

Tube formation by complex cellular processes in Ciona intestinalis notochord

(2009) Bo Dong et al.   DEVELOPMENTAL BIOLOGY

T (brachyury) gene duplication confers major susceptibility to familial chordoma

(2009) Xiaohong R Yang et al.   NATURE GENETICS

A gene regulatory network directed by zebrafish No tail accounts for its roles in mesoderm formation

(2009) R. H. Morley et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Ascidians and the Plasticity of the Chordate Developmental Program

(2008) Patrick Lemaire et al.   CURRENT BIOLOGY

brachyury null mutant-induced defects in juvenile ascidian endodermal organs

(2008) S. Chiba et al.   DEVELOPMENT

Evolutionary conservation of vertebrate notochord genes in the ascidianCiona intestinalis

(2008) Jamie E. Kugler et al.   GENESIS

Transcription Factors Bind Thousands of Active and Inactive Regions in the Drosophila Blastoderm

(2008) Xiao-yong Li et al.   PLOS BIOLOGY

Improved genome assembly and evidence-based global gene model set for the chordate Ciona intestinalis: new insight into intron and operon populations

(2008) Yutaka Satou et al.   GENOME BIOLOGY

Developmental expression ofglutamic acid decarboxylaseand ofγ-aminobutyricacid type B receptors in the ascidianCiona intestinalis

(2007) Giuliana Zega et al.   JOURNAL OF COMPARATIVE NEUROLOGY