Phylogeny-driven target selection for large-scale genome-sequencing (and other) projects
Published 2013 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Phylogeny-driven target selection for large-scale genome-sequencing (and other) projects
Authors
Keywords
phylogenetic diversity, genomics, taxon selection, 16S rRNA, tree of life, Genomic Encyclopedia, <em class=EmphasisTypeItalic >Roseobacter</em> clade
Journal
Standards in Genomic Sciences
Volume 8, Issue 2, Pages 360-374
Publisher
Springer Nature
Online
2013-06-21
DOI
10.4056/sigs.3446951
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Complete genome sequence of the facultatively chemolithoautotrophic and methylotrophic alpha Proteobacterium Starkeya novella type strain (ATCC 8093T)
- (2012) Ulrike Kappler et al. Standards in Genomic Sciences
- Complete genome sequence of the termite hindgut bacterium Spirochaeta coccoides type strain (SPN1T), reclassification in the genus Sphaerochaeta as Sphaerochaeta coccoides comb. nov. and emendations of the family Spirochaetaceae and the genus Sphaerochaeta
- (2012) Birte Abt et al. Standards in Genomic Sciences
- The history of the tetracyclines
- (2011) Mark L. Nelson et al. Annals of the New York Academy of Sciences
- Macrolide antibiotics in the ribosome exit tunnel: species-specific binding and action
- (2011) Krishna Kannan et al. Annals of the New York Academy of Sciences
- Penicillin: the medicine with the greatest impact on therapeutic outcomes
- (2011) Nelson Kardos et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- The DNA Bank Network: The Start from a German Initiative
- (2011) Birgit Gemeinholzer et al. BIOPRESERVATION AND BIOBANKING
- The Genomes OnLine Database (GOLD) v.4: status of genomic and metagenomic projects and their associated metadata
- (2011) I. Pagani et al. NUCLEIC ACIDS RESEARCH
- Release LTPs104 of the All-Species Living Tree
- (2011) Raúl Munoz et al. SYSTEMATIC AND APPLIED MICROBIOLOGY
- Complete genome sequence of Weeksella virosa type strain (9751T)
- (2011) Elke Lang et al. Standards in Genomic Sciences
- Complete genome sequence of the hyperthermophilic chemolithoautotroph Pyrolobus fumarii type strain (1AT)
- (2011) Iain Anderson et al. Standards in Genomic Sciences
- Complete genome sequence of the thermophilic, hydrogen-oxidizing Bacillus tusciae type strain (T2T) and reclassification in the new genus, Kyrpidia gen. nov. as Kyrpidia tusciae comb. nov. and emendation of the family Alicyclobacillaceae da Costa and Rainey, 2010.
- (2011) Hans-Peter Klenk et al. Standards in Genomic Sciences
- Non-contiguous finished genome sequence and contextual data of the filamentous soil bacterium Ktedonobacter racemifer type strain (SOSP1-21T)
- (2011) Yun-juan Chang et al. Standards in Genomic Sciences
- En route to a genome-based classification of Archaea and Bacteria?
- (2010) H.-P. Klenk et al. SYSTEMATIC AND APPLIED MICROBIOLOGY
- Standard operating procedure for calculating genome-to-genome distances based on high-scoring segment pairs
- (2010) Alexander F. Auch et al. Standards in Genomic Sciences
- Complete genome sequence of Planctomyces limnophilus type strain (Mü 290T)
- (2010) Kurt LaButti et al. Standards in Genomic Sciences
- IMG ER: a system for microbial genome annotation expert review and curation
- (2009) Victor M. Markowitz et al. BIOINFORMATICS
- The complete genome sequence of the algal symbiont Dinoroseobacter shibae: a hitchhiker's guide to life in the sea
- (2009) Irene Wagner-Döbler et al. ISME Journal
- The aminocoumarins: biosynthesis and biology
- (2009) Lutz Heide NATURAL PRODUCT REPORTS
- A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea
- (2009) Dongying Wu et al. NATURE
- Assembling the Marine Metagenome, One Cell at a Time
- (2009) Tanja Woyke et al. PLoS One
- Taxon Selection under Split Diversity
- (2009) Bui Quang Minh et al. SYSTEMATIC BIOLOGY
- Complete genome sequence of Desulfotomaculum acetoxidans type strain (5575T)
- (2009) Stefan Spring et al. Standards in Genomic Sciences
- Diversity, ecology, and genomics of the Roseobacter clade: a short overview
- (2008) Thorsten Brinkhoff et al. ARCHIVES OF MICROBIOLOGY
- Genomic sequencing of single microbial cells from environmental samples
- (2008) Thomas Ishoey et al. CURRENT OPINION IN MICROBIOLOGY
- The minimum information about a genome sequence (MIGS) specification
- (2008) Dawn Field et al. NATURE BIOTECHNOLOGY
- A Rapid Bootstrap Algorithm for the RAxML Web Servers
- (2008) Alexandros Stamatakis et al. SYSTEMATIC BIOLOGY
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExplorePublish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn More