Exploring dengue genome to construct a multi-epitope based subunit vaccine by utilizing immunoinformatics approach to battle against dengue infection

Immunoinformatics analysis and in silico designing of a novel multi-epitope peptide vaccine against Staphylococcus aureus

(2017) Nasim Hajighahramani et al.   INFECTION GENETICS AND EVOLUTION

High-throughput virtual screening and quantum mechanics approach to develop imipramine analogues as leads against trypanothione reductase of leishmania

(2016) Rajan Kumar Pandey et al.   BIOMEDICINE & PHARMACOTHERAPY

Molecular Modeling and Virtual Screening Approach to Discover Potential Antileishmanial Inhibitors Against Ornithine Decarboxylase

(2016) Rajan Kumar Pandey et al.   COMBINATORIAL CHEMISTRY & HIGH THROUGHPUT SCREENING

Synonymous codon usage pattern in glycoprotein gene of rabies virus

(2016) Sudhir Morla et al.   GENE

A multi-subunit based, thermodynamically stable model vaccine using combined immunoinformatics and protein structure based approach

(2016) Aarti Rana et al.   IMMUNOBIOLOGY

Febrifugine analogues as Leishmania donovani trypanothione reductase inhibitors: binding energy analysis assisted by molecular docking, ADMET and molecular dynamics simulation

(2016) Rajan Kumar Pandey et al.   JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS

Structure-based virtual screening, molecular docking, ADMET and molecular simulations to develop benzoxaborole analogs as potential inhibitor against Leishmania donovani trypanothione reductase

(2016) Rajan Kumar Pandey et al.   JOURNAL OF RECEPTORS AND SIGNAL TRANSDUCTION

Recombinant Dengue virus protein NS2B alters membrane permeability in different membrane models

(2016) Moisés León-Juárez et al.   Virology Journal

Developing imidazole analogues as potential inhibitor forLeishmania donovanitrypanothione reductase: virtual screening, molecular docking, dynamics and ADMET approach

(2015) Rajan Kumar Pandey et al.   JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS

Dengue Virus Non-structural Protein 1 Modulates Infectious Particle Production via Interaction with the Structural Proteins

(2015) Pietro Scaturro et al.   PLoS Pathogens

Economic and Disease Burden of Dengue Illness in India

(2014) Donald S. Shepard et al.   AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE

SSpro/ACCpro 5: almost perfect prediction of protein secondary structure and relative solvent accessibility using profiles, machine learning and structural similarity

(2014) C. N. Magnan et al.   BIOINFORMATICS

Highly Conserved Residues in the Helical Domain of Dengue Virus Type 1 Precursor Membrane Protein Are Involved in Assembly, Precursor Membrane (prM) Protein Cleavage, and Entry

(2014) Szu-Chia Hsieh et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

A novel multi-epitope peptide vaccine against cancer: An in silico approach

(2014) Navid Nezafat et al.   JOURNAL OF THEORETICAL BIOLOGY

Two Distinct Sets of NS2A Molecules Are Responsible for Dengue Virus RNA Synthesis and Virion Assembly

(2014) Xuping Xie et al.   JOURNAL OF VIROLOGY

The global distribution and burden of dengue

(2013) Samir Bhatt et al.   NATURE

GalaxyRefine: protein structure refinement driven by side-chain repacking

(2013) Lim Heo et al.   NUCLEIC ACIDS RESEARCH

Modulation of HIV peptide antigen specific cellular immune response by synthetic α- and β-defensin peptides

(2013) Teena Mohan et al.   VACCINE

Template-based protein structure modeling using the RaptorX web server

(2012) Morten Källberg et al.   Nature Protocols

Raptorx: Exploiting structure information for protein alignment by statistical inference

(2011) Jian Peng et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

NS5 of Dengue Virus Mediates STAT2 Binding and Degradation

(2009) J. Ashour et al.   JOURNAL OF VIROLOGY

The Immune Epitope Database 2.0

(2009) Randi Vita et al.   NUCLEIC ACIDS RESEARCH

ElliPro: a new structure-based tool for the prediction of antibody epitopes

(2008) Julia Ponomarenko et al.   BMC BIOINFORMATICS

Human TLR3 recognizes dengue virus and modulates viral replicationin vitro

(2008) Yi-Ting Tsai et al.   CELLULAR MICROBIOLOGY

Predicting linear B‐cell epitopes using string kernels

(2008) Yasser EL‐Manzalawy et al.   JOURNAL OF MOLECULAR RECOGNITION

Structure of the Immature Dengue Virus at Low pH Primes Proteolytic Maturation

(2008) I-M. Yu et al.   SCIENCE