Autogenic succession and deterministic recovery following disturbance in soil bacterial communities

Resource pulses can alleviate the biodiversity–invasion relationship in soil microbial communities

(2015) Cyrus A. Mallon et al.   ECOLOGY

Resilience vs. historical contingency in microbial responses to environmental change

(2015) Christine V. Hawkes et al.   ECOLOGY LETTERS

Management of Microbial Communities through Transient Disturbances Enhances the Functional Resilience of Nitrifying Gas-Biofilters to Future Disturbances

(2015) Léa Cabrol et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Disentangling mechanisms that mediate the balance between stochastic and deterministic processes in microbial succession

(2015) Francisco Dini-Andreote et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Abiotic stress tolerance and competition-related traits underlie phylogenetic clustering in soil bacterial communities

(2014) Marta Goberna et al.   ECOLOGY LETTERS

When, where and how does microbial community composition matter?

(2014) Diana R. Nemergut et al.   Frontiers in Microbiology

UPARSE: highly accurate OTU sequences from microbial amplicon reads

(2013) Robert C Edgar   NATURE METHODS

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

(2013) Paul J. McMurdie et al.   PLoS One

Stability of soil microbial structure and activity depends on microbial diversity

(2013) Vincent Tardy et al.   Environmental Microbiology Reports

Unexpected Diversity during Community Succession in the Apple Flower Microbiome

(2013) A. Shade et al.   mBio

Selection for Cu-Tolerant Bacterial Communities with Altered Composition, but Unaltered Richness, via Long-Term Cu Exposure

(2012) Jeanette Berg et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Stochastic and deterministic assembly processes in subsurface microbial communities

(2012) James C Stegen et al.   ISME Journal

A review of diversity-stability relationship of soil microbial community: What do we not know?

(2012) Huan Deng   JOURNAL OF ENVIRONMENTAL SCIENCES

Spatial and Temporal Variation of Archaeal, Bacterial and Fungal Communities in Agricultural Soils

(2012) Michele C. Pereira e Silva et al.   PLoS One

Rainfall-induced carbon dioxide pulses result from sequential resuscitation of phylogenetically clustered microbial groups

(2012) S. A. Placella et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Fluctuations in ammonia oxidizing communities across agricultural soils are driven by soil structure and pH

(2012) Michele C. Pereira e Silva   Frontiers in Microbiology

Fundamentals of Microbial Community Resistance and Resilience

(2012) Ashley Shade et al.   Frontiers in Microbiology

Seasonal variations in the diversity and abundance of diazotrophic communities across soils

(2011) Michele C. Pereira e Silva et al.   FEMS MICROBIOLOGY ECOLOGY

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Conceptual Synthesis in Community Ecology

(2010) Mark Vellend   QUARTERLY REVIEW OF BIOLOGY

Community niche predicts the functioning of denitrifying bacterial assemblages

(2009) Joana F. Salles et al.   ECOLOGY

Testing the functional significance of microbial community composition

(2009) Michael S. Strickland et al.   ECOLOGY

Litter quality is in the eye of the beholder: initial decomposition rates as a function of inoculum characteristics

(2008) Michael S. Strickland et al.   FUNCTIONAL ECOLOGY

Resistance, resilience, and redundancy in microbial communities

(2008) S. D. Allison et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA