Detecting the Molecular System Signatures of Idiopathic Pulmonary Fibrosis through Integrated Genomic Analysis
Published 2017 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Detecting the Molecular System Signatures of Idiopathic Pulmonary Fibrosis through Integrated Genomic Analysis
Authors
Keywords
-
Journal
Scientific Reports
Volume 7, Issue 1, Pages -
Publisher
Springer Nature
Online
2017-05-02
DOI
10.1038/s41598-017-01765-6
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- MMP16 Mediates a Proteolytic Switch to Promote Cell-Cell Adhesion, Collagen Alignment, and Lymphatic Invasion in Melanoma
- (2015) O. Tatti et al. CANCER RESEARCH
- Orchestrating high-throughput genomic analysis with Bioconductor
- (2015) Wolfgang Huber et al. NATURE METHODS
- limma powers differential expression analyses for RNA-sequencing and microarray studies
- (2015) Matthew E. Ritchie et al. NUCLEIC ACIDS RESEARCH
- miRTarBase 2016: updates to the experimentally validated miRNA-target interactions database
- (2015) Chih-Hung Chou et al. NUCLEIC ACIDS RESEARCH
- Compromised peroxisomes in idiopathic pulmonary fibrosis, a vicious cycle inducing a higher fibrotic response via TGF-β signaling
- (2015) Gani Oruqaj et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Predicting effective microRNA target sites in mammalian mRNAs
- (2015) Vikram Agarwal et al. eLife
- Nintedanib in the treatment of idiopathic pulmonary fibrosis
- (2015) Mariano E. Mazzei et al. Therapeutic Advances in Respiratory Disease
- The Anti-fibrotic Effects and Mechanisms of MicroRNA-486-5p in Pulmonary Fibrosis
- (2015) Xiaoming Ji et al. Scientific Reports
- MicroRNA mimicry blocks pulmonary fibrosis
- (2014) R. L. Montgomery et al. EMBO Molecular Medicine
- The Antifibrotic Effects and Mechanisms of MicroRNA-26a Action in Idiopathic Pulmonary Fibrosis
- (2014) Haihai Liang et al. MOLECULAR THERAPY
- STRING v10: protein–protein interaction networks, integrated over the tree of life
- (2014) Damian Szklarczyk et al. NUCLEIC ACIDS RESEARCH
- Transcriptome Analysis Reveals Differential Splicing Events in IPF Lung Tissue
- (2014) Tracy Nance et al. PLoS One
- Integrative Identification of Deregulated MiRNA/TF-Mediated Gene Regulatory Loops and Networks in Prostate Cancer
- (2014) Ali Sobhi Afshar et al. PLoS One
- Deciphering miRNA transcription factor feed-forward loops to identify drug repurposing candidates for cystic fibrosis
- (2014) Zhichao Liu et al. Genome Medicine
- Overexpression of Sulf2 in idiopathic pulmonary fibrosis
- (2013) Xinping Yue et al. GLYCOBIOLOGY
- Detecting Splicing Variants in Idiopathic Pulmonary Fibrosis from Non-Differentially Expressed Genes
- (2013) Nan Deng et al. PLoS One
- Expression of cilium-associated genes defines novel molecular subtypes of idiopathic pulmonary fibrosis
- (2013) Ivana V Yang et al. THORAX
- Altered DNA Methylation Profile in Idiopathic Pulmonary Fibrosis
- (2012) Yan Y. Sanders et al. AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE
- Tetraspanin CD151 Protects against Pulmonary Fibrosis by Maintaining Epithelial Integrity
- (2012) Kazuyuki Tsujino et al. AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE
- Profibrotic Role of miR-154 in Pulmonary Fibrosis
- (2012) Jadranka Milosevic et al. AMERICAN JOURNAL OF RESPIRATORY CELL AND MOLECULAR BIOLOGY
- De novo sequencing and characterization of Picrorhiza kurrooa transcriptome at two temperatures showed major transcriptome adjustments
- (2012) Parul Gahlan et al. BMC GENOMICS
- miR-29 Inhibits Bleomycin-induced Pulmonary Fibrosis in Mice
- (2012) Jun Xiao et al. MOLECULAR THERAPY
- Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks
- (2012) Cole Trapnell et al. Nature Protocols
- Activation of canonical Wnt signalling is required for TGF-β-mediated fibrosis
- (2012) Alfiya Akhmetshina et al. Nature Communications
- Unknown
- (2012) ACM Transactions on Intelligent Systems and Technology
- Bayesian probit regression model for the diagnosis of pulmonary fibrosis: proof-of-principle
- (2011) Eric B Meltzer et al. BMC Medical Genomics
- Systems biology of interstitial lung diseases: integration of mRNA and microRNA expression changes
- (2011) Ji-Hoon Cho et al. BMC Medical Genomics
- AnimalTFDB: a comprehensive animal transcription factor database
- (2011) H.-M. Zhang et al. NUCLEIC ACIDS RESEARCH
- Gene Set Analysis of Lung Samples Provides Insight into Pathogenesis of Progressive, Fibrotic Pulmonary Sarcoidosis
- (2010) Helen E. Lockstone et al. AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE
- Inhibition and Role of let-7d in Idiopathic Pulmonary Fibrosis
- (2010) Kusum V. Pandit et al. AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE
- Clinical Course and Prediction of Survival in Idiopathic Pulmonary Fibrosis
- (2010) Brett Ley et al. AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE
- Tgfβ2 and 3 are coexpressed with their extracellular regulator Ltbp1 in the early limb bud and modulate mesodermal outgrowth and BMP signaling in chicken embryos
- (2010) Carlos I Lorda-Diez et al. BMC DEVELOPMENTAL BIOLOGY
- A Novel microRNA and transcription factor mediated regulatory network in schizophrenia
- (2010) An-Yuan Guo et al. BMC Systems Biology
- Genomic phenotype of non-cultured pulmonary fibroblasts in idiopathic pulmonary fibrosis
- (2010) Margaret C. Emblom-Callahan et al. GENOMICS
- miR-21 mediates fibrogenic activation of pulmonary fibroblasts and lung fibrosis
- (2010) Gang Liu et al. JOURNAL OF EXPERIMENTAL MEDICINE
- Gene Expression Profiling Identifies MMP-12 and ADAMDEC1 as Potential Pathogenic Mediators of Pulmonary Sarcoidosis
- (2009) Elliott D. Crouser et al. AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE
- WNT5A Is a Regulator of Fibroblast Proliferation and Resistance to Apoptosis
- (2009) Louis J. Vuga et al. AMERICAN JOURNAL OF RESPIRATORY CELL AND MOLECULAR BIOLOGY
- Transcription Factor GATA-6 Is Expressed in Quiescent Myofibroblasts in Idiopathic Pulmonary Fibrosis
- (2009) Outi Leppäranta et al. AMERICAN JOURNAL OF RESPIRATORY CELL AND MOLECULAR BIOLOGY
- TopHat: discovering splice junctions with RNA-Seq
- (2009) Cole Trapnell et al. BIOINFORMATICS
- Prostaglandin F2α receptor signaling facilitates bleomycin-induced pulmonary fibrosis independently of transforming growth factor-β
- (2009) Toru Oga et al. NATURE MEDICINE
- Identification of Keratinocyte Growth Factor as a Target of microRNA-155 in Lung Fibroblasts: Implication in Epithelial-Mesenchymal Interactions
- (2009) Nicolas Pottier et al. PLoS One
- A global pathway crosstalk network
- (2008) Yong Li et al. BIOINFORMATICS
- Fibrocytes are a potential source of lung fibroblasts in idiopathic pulmonary fibrosis
- (2008) Annika Andersson-Sjöland et al. INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY
- Transforming Growth Factor-β1 Induces Heparan Sulfate 6-O-Endosulfatase 1 Expressionin Vitroandin Vivo
- (2008) Xinping Yue et al. JOURNAL OF BIOLOGICAL CHEMISTRY
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreDiscover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversation