Parallel-META 3: Comprehensive taxonomical and functional analysis platform for efficient comparison of microbial communities
Published 2017 View Full Article
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Title
Parallel-META 3: Comprehensive taxonomical and functional analysis platform for efficient comparison of microbial communities
Authors
Keywords
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Journal
Scientific Reports
Volume 7, Issue 1, Pages -
Publisher
Springer Nature
Online
2017-01-12
DOI
10.1038/srep40371
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Related references
Note: Only part of the references are listed.- Microbiome Data Science: Understanding Our Microbial Planet
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- Parallel-META 2.0: Enhanced Metagenomic Data Analysis with Functional Annotation, High Performance Computing and Advanced Visualization
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- Parallel-META: efficient metagenomic data analysis based on high-performance computation
- (2013) Xiaoquan Su et al. BMC Systems Biology
- Computational meta'omics for microbial community studies
- (2013) N. Segata et al. Molecular Systems Biology
- Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences
- (2013) Morgan G I Langille et al. NATURE BIOTECHNOLOGY
- A Guide to Enterotypes across the Human Body: Meta-Analysis of Microbial Community Structures in Human Microbiome Datasets
- (2013) Omry Koren et al. PLoS Computational Biology
- A framework for human microbiome research
- (2012) NATURE
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- IMG: the integrated microbial genomes database and comparative analysis system
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- KEGG for integration and interpretation of large-scale molecular data sets
- (2011) M. Kanehisa et al. NUCLEIC ACIDS RESEARCH
- Accelerated Profile HMM Searches
- (2011) Sean R. Eddy PLoS Computational Biology
- QIIME allows analysis of high-throughput community sequencing data
- (2010) J Gregory Caporaso et al. NATURE METHODS
- FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments
- (2010) Morgan N. Price et al. PLoS One
- Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities
- (2009) P. D. Schloss et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- The Sequence Alignment/Map format and SAMtools
- (2009) H. Li et al. BIOINFORMATICS
- The core gut microbiome, energy balance and obesity
- (2009) Peter J. Turnbaugh et al. JOURNAL OF PHYSIOLOGY-LONDON
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