Reliability of DNA methylation measures from dried blood spots and mononuclear cells using the HumanMethylation450k BeadArray

Global measures of peripheral blood-derived DNA methylation as a risk factor in the development of mature B-cell neoplasms

(2016) Nicole Wong Doo et al.   Epigenomics

CpGFilter: model-based CpG probe filtering with replicates for epigenome-wide association studies

(2015) Jun Chen et al.   BIOINFORMATICS

A systematic study of normalization methods for Infinium 450K methylation data using whole-genome bisulfite sequencing data

(2015) Ting Wang et al.   Epigenetics

Epigenome-wide association study (EWAS) of BMI, BMI change and waist circumference in African American adults identifies multiple replicated loci

(2015) Ellen W. Demerath et al.   HUMAN MOLECULAR GENETICS

Dynamics of smoking-induced genome-wide methylation changes with time since smoking cessation

(2015) Florence Guida et al.   HUMAN MOLECULAR GENETICS

Reproducibility of Telomere Length Assessment - An International Collaborative Study

(2015) Carmen M. Martin-Ruiz et al.   INTERNATIONAL JOURNAL OF EPIDEMIOLOGY

The repeatability of DNA methylation measures may also affect the power of epigenome-wide association studies: Table 1.

(2015) Pierre-Antoine Dugué et al.   INTERNATIONAL JOURNAL OF EPIDEMIOLOGY

Power and sample size estimation for epigenome-wide association scans to detect differential DNA methylation

(2015) Pei-Chien Tsai et al.   INTERNATIONAL JOURNAL OF EPIDEMIOLOGY

Removing unwanted variation in a differential methylation analysis of Illumina HumanMethylation450 array data

(2015) Jovana Maksimovic et al.   NUCLEIC ACIDS RESEARCH

Early life lead exposure causes gender-specific changes in the DNA methylation profile of DNA extracted from dried blood spots

(2015) Arko Sen et al.   Epigenomics

DNA methylation profiling: comparison of genome-wide sequencing methods and the Infinium Human Methylation 450 Bead Chip

(2015) Denise L Walker et al.   Epigenomics

Protein profiling reveals consequences of lifestyle choices on predicted biological aging

(2015) Stefan Enroth et al.   Scientific Reports

Epigenome-wide association study reveals decreased average methylation levels years before breast cancer diagnosis

(2015) Karin van Veldhoven et al.   Clinical Epigenetics

DNA methylation changes of whole blood cells in response to active smoking exposure in adults: a systematic review of DNA methylation studies

(2015) Xu Gao et al.   Clinical Epigenetics

Epigenome-wide association of DNA methylation markers in peripheral blood from Indian Asians and Europeans with incident type 2 diabetes: a nested case-control study

(2015) John C Chambers et al.   Lancet Diabetes & Endocrinology

Minfi: a flexible and comprehensive Bioconductor package for the analysis of Infinium DNA methylation microarrays

(2014) Martin J. Aryee et al.   BIOINFORMATICS

Evaluation of microarray-based DNA methylation measurement using technical replicates: the Atherosclerosis Risk In Communities (ARIC) Study

(2014) Maitreyee Bose et al.   BMC BIOINFORMATICS

Reducing the risk of false discovery enabling identification of biologically significant genome-wide methylation status using the HumanMethylation450 array

(2014) Haroon Naeem et al.   BMC GENOMICS

Epigenome-wide methylation in DNA from peripheral blood as a marker of risk for breast cancer

(2014) Gianluca Severi et al.   BREAST CANCER RESEARCH AND TREATMENT

Intraindividual Variation and Short-term Temporal Trend in DNA Methylation of Human Blood

(2014) Y. B. Shvetsov et al.   CANCER EPIDEMIOLOGY BIOMARKERS & PREVENTION

Temporal Stability and Determinants of White Blood Cell DNA Methylation in the Breakthrough Generations Study

(2014) J. M. Flanagan et al.   CANCER EPIDEMIOLOGY BIOMARKERS & PREVENTION

Aging and epigenetic drift: a vicious cycle

(2014) Jean-Pierre Issa   JOURNAL OF CLINICAL INVESTIGATION

The use of DNA from archival dried blood spots with the Infinium HumanMethylation450 array

(2013) JiHoon E Joo et al.   BMC BIOTECHNOLOGY

A data-driven approach to preprocessing Illumina 450K methylation array data

(2013) Ruth Pidsley et al.   BMC GENOMICS

Considerations for normalization of DNA methylation data by Illumina 450K BeadChip assay in population studies

(2013) Paul Yousefi et al.   Epigenetics

A systematic assessment of normalization approaches for the Infinium 450K methylation platform

(2013) Michael C Wu et al.   Epigenetics

Tobacco Smoking Leads to Extensive Genome-Wide Changes in DNA Methylation

(2013) Sonja Zeilinger et al.   PLoS One

Commentary: The seven plagues of epigenetic epidemiology

(2012) Bastiaan T Heijmans et al.   INTERNATIONAL JOURNAL OF EPIDEMIOLOGY

SWAN: Subset-quantile Within Array Normalization for Illumina Infinium HumanMethylation450 BeadChips

(2012) Jovana Maksimovic et al.   GENOME BIOLOGY

Validation of a DNA methylation microarray for 450,000 CpG sites in the human genome

(2011) Juan Sandoval et al.   Epigenetics

Method to detect differentially methylated loci with case-control designs using Illumina arrays

(2011) Shuang Wang   GENETIC EPIDEMIOLOGY

High density DNA methylation array with single CpG site resolution

(2011) Marina Bibikova et al.   GENOMICS

Epigenome-wide association studies for common human diseases

(2011) Vardhman K. Rakyan et al.   NATURE REVIEWS GENETICS

Evaluation of the Infinium Methylation 450K technology

(2011) Sarah Dedeurwaerder et al.   Epigenomics

Comparison of Beta-value and M-value methods for quantifying methylation levels by microarray analysis

(2010) Pan Du et al.   BMC BIOINFORMATICS

Tackling the widespread and critical impact of batch effects in high-throughput data

(2010) Jeffrey T. Leek et al.   NATURE REVIEWS GENETICS