Multi-targeted metagenetic analysis of the influence of climate and environmental parameters on soil microbial communities along an elevational gradient

A comprehensive benchmarking study of protocols and sequencing platforms for 16S rRNA community profiling

(2016) Rosalinda D’Amore et al.   BMC GENOMICS

Metatranscriptomic census of active protists in soils

(2015) Stefan Geisen et al.   ISME Journal

Estimating Snow Cover Duration from Ground Temperature

(2015) Irene E. Teubner et al.   Journal of Applied Meteorology and Climatology

Similarities and Contrasts in the Archaeal Community of Two Japanese Mountains: Mt. Norikura Compared to Mt. Fuji

(2015) Dharmesh Singh et al.   MICROBIAL ECOLOGY

Response to Comment on "Global diversity and geography of soil fungi"

(2015) L. Tedersoo et al.   SCIENCE

Comment on "Global diversity and geography of soil fungi"

(2015) C. W. Schadt et al.   SCIENCE

The Community Structures of Prokaryotes and Fungi in Mountain Pasture Soils are Highly Correlated and Primarily Influenced by pH

(2015) Anders Lanzén et al.   Frontiers in Microbiology

Shotgun metagenomes and multiple primer pair-barcode combinations of amplicons reveal biases in metabarcoding analyses of fungi

(2015) Leho Tedersoo et al.   MycoKeys

Soil bacterial diversity patterns and drivers along an elevational gradient on Shennongjia Mountain, China

(2015) Yuguang Zhang et al.   Microbial Biotechnology

Vegetation-Associated Impacts on Arctic Tundra Bacterial and Microeukaryotic Communities

(2014) Yu Shi et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Contrasting elevational diversity patterns between eukaryotic soil microbes and plants

(2014) Congcong Shen et al.   ECOLOGY

Improving ITS sequence data for identification of plant pathogenic fungi

(2014) R. Henrik Nilsson et al.   FUNGAL DIVERSITY

The mid-domain effect in ectomycorrhizal fungi: range overlap along an elevation gradient on Mount Fuji, Japan

(2014) Yumiko Miyamoto et al.   ISME Journal

Altitudinal Distribution Patterns of Soil Bacterial and Archaeal Communities Along Mt. Shegyla on the Tibetan Plateau

(2014) Jun-Tao Wang et al.   MICROBIAL ECOLOGY

Characterization of the 18S rRNA Gene for Designing Universal Eukaryote Specific Primers

(2014) Kenan Hadziavdic et al.   PLoS One

Leaf and Root-Associated Fungal Assemblages Do Not Follow Similar Elevational Diversity Patterns

(2014) Aurore Coince et al.   PLoS One

Bacterial diversity in the mountains of South-West China: Climate dominates over soil parameters

(2013) Dharmesh Singh et al.   JOURNAL OF MICROBIOLOGY

Patterns and Processes of Microbial Community Assembly

(2013) D. R. Nemergut et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

UPARSE: highly accurate OTU sequences from microbial amplicon reads

(2013) Robert C Edgar   NATURE METHODS

Digging the New York City Skyline: Soil Fungal Communities in Green Roofs and City Parks

(2013) Krista L. McGuire et al.   PLoS One

Strong elevational trends in soil bacterial community composition on Mt. Halla, South Korea

(2013) Dharmesh Singh et al.   SOIL BIOLOGY & BIOCHEMISTRY

Subhumid pasture soil microbial communities affected by presence of grazing, but not grazing management

(2012) Lawrence G. Oates et al.   APPLIED SOIL ECOLOGY

Biodiversity loss and its impact on humanity

(2012) Bradley J. Cardinale et al.   NATURE

Testing the Limits of 454 Pyrotag Sequencing: Reproducibility, Quantitative Assessment and Comparison to T-RFLP Fingerprinting of Aquifer Microbes

(2012) Giovanni Pilloni et al.   PLoS One

CREST – Classification Resources for Environmental Sequence Tags

(2012) Anders Lanzén et al.   PLoS One

Soil pH drives the spatial distribution of bacterial communities along elevation on Changbai Mountain

(2012) Congcong Shen et al.   SOIL BIOLOGY & BIOCHEMISTRY

The intermediate disturbance hypothesis should be abandoned

(2012) Jeremy W. Fox   TRENDS IN ECOLOGY & EVOLUTION

Continent-wide response of mountain vegetation to climate change

(2012) Michael Gottfried et al.   Nature Climate Change

Bacterial-Fungal Interactions: Hyphens between Agricultural, Clinical, Environmental, and Food Microbiologists

(2011) P. Frey-Klett et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Regional and local patterns of ectomycorrhizal fungal diversity and community structure along an altitudinal gradient in the Hyrcanian forests of northern Iran

(2011) Mohammad Bahram et al.   NEW PHYTOLOGIST

Contrasting Diversity Patterns of Crenarchaeal, Bacterial and Fungal Soil Communities in an Alpine Landscape

(2011) Lucie Zinger et al.   PLoS One

Microbes do not follow the elevational diversity patterns of plants and animals

(2010) Noah Fierer et al.   ECOLOGY

The influence of vegetation type, soil properties and precipitation on the composition of soil mite and microbial communities at the landscape scale

(2010) Uffe N. Nielsen et al.   JOURNAL OF BIOGEOGRAPHY

Life history determines biogeographical patterns of soil bacterial communities over multiple spatial scales

(2010) A. BISSETT et al.   MOLECULAR ECOLOGY

Roots, Nitrogen Transformations, and Ecosystem Services

(2008) Louise E. Jackson et al.   Annual Review of Plant Biology

Functional diversity as indicator of the recovery of soil health derived from Thlaspi caerulescens growth and metal phytoextraction

(2008) Lur Epelde et al.   APPLIED SOIL ECOLOGY

Impact of biotic and abiotic interaction on soil microbial communities and functions: A field study

(2008) Brajesh K. Singh et al.   APPLIED SOIL ECOLOGY

Microbes on mountainsides: Contrasting elevational patterns of bacterial and plant diversity

(2008) J. A. Bryant et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA