The HUPO proteomics standards initiative- mass spectrometry controlled vocabulary

Recent developments in liquid chromatography–mass spectrometry and related techniques

(2012) Michal Holčapek et al.   JOURNAL OF CHROMATOGRAPHY A

A novel quantitative proteomics workflow by isobaric terminal labeling

(2012) Shu-Jun Yang et al.   Journal of Proteomics

imzML — A common data format for the flexible exchange and processing of mass spectrometry imaging data

(2012) Thorsten Schramm et al.   Journal of Proteomics

The mzIdentML Data Standard for Mass Spectrometry-Based Proteomics Results

(2012) Andrew R. Jones et al.   MOLECULAR & CELLULAR PROTEOMICS

The use of selected reaction monitoring in quantitative proteomics

(2012) Stephen W Holman et al.   Bioanalysis

The Units Ontology: a tool for integrating units of measurement in science

(2012) G. V. Gkoutos et al.   Database-The Journal of Biological Databases and Curation

Mass spectrometry based proteomics, background, status and future needs

(2012) Peter Roepstorff   Protein & Cell

Modern analytical techniques in metabolomics analysis

(2011) Aihua Zhang et al.   ANALYST

MeRy-B: a web knowledgebase for the storage, visualization, analysis and annotation of plant NMR metabolomic profiles

(2011) Hélène Ferry-Dumazet et al.   BMC PLANT BIOLOGY

Target discovery from data mining approaches

(2011) Yongliang Yang et al.   DRUG DISCOVERY TODAY

Selected reaction monitoring applied to proteomics

(2011) Sebastien Gallien et al.   JOURNAL OF MASS SPECTROMETRY

NCBO Resource Index: Ontology-based search and mining of biomedical resources

(2011) Clement Jonquet et al.   Journal of Web Semantics

mz5: Space- and Time-efficient Storage of Mass Spectrometry Data Sets

(2011) Mathias Wilhelm et al.   MOLECULAR & CELLULAR PROTEOMICS

TraML—A Standard Format for Exchange of Selected Reaction Monitoring Transition Lists

(2011) Eric W. Deutsch et al.   MOLECULAR & CELLULAR PROTEOMICS

Use of stable isotope labeling by amino acids in cell culture as a spike-in standard in quantitative proteomics

(2011) Tamar Geiger et al.   Nature Protocols

ISA software suite: supporting standards-compliant experimental annotation and enabling curation at the community level

(2010) P. Rocca-Serra et al.   BIOINFORMATICS

Quantitative metabolomics based on gas chromatography mass spectrometry: status and perspectives

(2010) Maud M. Koek et al.   Metabolomics

mzML—a Community Standard for Mass Spectrometry Data

(2010) Lennart Martens et al.   MOLECULAR & CELLULAR PROTEOMICS

BRENDA, the enzyme information system in 2011

(2010) M. Scheer et al.   NUCLEIC ACIDS RESEARCH

Recommendations from the 2008 International Summit on Proteomics Data Release and Sharing Policy: The Amsterdam Principles

(2009) Henry Rodriguez et al.   JOURNAL OF PROTEOME RESEARCH

The Proteomics Identifications database: 2010 update

(2009) Juan Antonio Vizcaíno et al.   NUCLEIC ACIDS RESEARCH

BioPortal: ontologies and integrated data resources at the click of a mouse

(2009) N. F. Noy et al.   NUCLEIC ACIDS RESEARCH

PubChem: a public information system for analyzing bioactivities of small molecules

(2009) Y. Wang et al.   NUCLEIC ACIDS RESEARCH

The PSI semantic validator: A framework to check MIAPE compliance of proteomics data

(2009) Luisa Montecchi-Palazzi et al.   PROTEOMICS