Stochastic signalling rewires the interaction map of a multiple feedback network during yeast evolution

Mammalian Genes Are Transcribed with Widely Different Bursting Kinetics

(2011) D. M. Suter et al.   SCIENCE

Dynamic Analysis of Stochastic Transcription Cycles

(2011) Claire V. Harper et al.   PLOS BIOLOGY

Is Transcription Factor Binding Site Turnover a Sufficient Explanation for Cis-Regulatory Sequence Divergence?

(2010) Sandeep Venkataram et al.   Genome Biology and Evolution

Dominant Role for Signal Transduction in the Transcriptional Memory of Yeast GAL Genes

(2010) S. Kundu et al.   MOLECULAR AND CELLULAR BIOLOGY

Systems biology: The cost of feedback control

(2010) Li Sun et al.   NATURE

Noise Can Induce Bimodality in Positive Transcriptional Feedback Loops Without Bistability

(2010) T.-L. To et al.   SCIENCE

A General Mechanism for Network-Dosage Compensation in Gene Circuits

(2010) M. Acar et al.   SCIENCE

Spatial Epigenetic Control of Mono- and Bistable Gene Expression

(2010) János Z. Kelemen et al.   PLOS BIOLOGY

Evolution of Transcriptional Regulatory Circuits in Bacteria

(2009) J. Christian Perez et al.   CELL

Synergy of Repression and Silencing Gradients Along the Chromosome

(2009) Prasuna Ratna et al.   JOURNAL OF MOLECULAR BIOLOGY

Emergent bistability by a growth-modulating positive feedback circuit

(2009) Cheemeng Tan et al.   Nature Chemical Biology

Tuning the Activation Threshold of a Kinase Network by Nested Feedback Loops

(2009) Q. A. Justman et al.   SCIENCE

Robustness analysis of cellular memory in an autoactivating positive feedback system

(2008) Zhang Cheng et al.   FEBS LETTERS

Metabolic gene regulation in a dynamically changing environment

(2008) Matthew R. Bennett et al.   NATURE

Turning a hobby into a job: How duplicated genes find new functions

(2008) Gavin C. Conant et al.   NATURE REVIEWS GENETICS

Transcriptional Autoregulatory Loops Are Highly Conserved in Vertebrate Evolution

(2008) Szymon M. Kiełbasa et al.   PLoS One

Analytical distributions for stochastic gene expression

(2008) V. Shahrezaei et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Evolution of gene sequence and gene expression are not correlated in yeast

(2008) Itay Tirosh et al.   TRENDS IN GENETICS