Article
Oncology
Yicong Yao, Yi Wang, Denglong Wu, Baoying Hu
Summary: The increased expression of CDC6 is potentially a poor prognostic factor in ccRCC patients. High CDC6 expression is correlated with malignant characteristics of tumors and multiple signaling pathways, as well as with immune-related factors, tumor microenvironment, and immune cell infiltration. The results from the TCGA database also show a significant relationship between CDC6 and immune checkpoint molecules and immune cells.
FRONTIERS IN ONCOLOGY
(2021)
Article
Oncology
Hui Meng, Xuewen Jiang, Huangwei Huang, Neng Shen, Changsheng Guo, Chunxiao Yu, Gang Yin, Yu Wang
Summary: The study analyzed the correlation between genetic alterations and expression levels of MUCIN genes and the prognosis of ccRCC patients, identifying two major clusters with distinct tumor microenvironment features affecting survival outcomes.
Article
Cell Biology
Fan Zhang, Junyu Lin, Dechao Feng, Jiayu Liang, Yiping Lu, Zhihong Liu, Xianding Wang
Summary: This study explored the correlation between cuprotosis and clear cell renal cell carcinoma (ccRCC) and developed a cuprotosis-related signature to predict the prognosis of patients with ccRCC. The signature risk score was significantly associated with tumor stage, histological grade, and immune cell infiltrates in ccRCC.
FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY
(2022)
Article
Oncology
Shouyong Liu, Yi Wang, Chenkui Miao, Qianwei Xing, Zengjun Wang
Summary: CDCA7 is overexpressed in ccRCC and associated with shorter overall survival. It is identified as an independent prognostic factor and closely related to microsatellite instability, tumor mutational burden, and immunity.
CANCER CELL INTERNATIONAL
(2021)
Article
Oncology
Fajuan Cheng, Bin Zheng, Jianwei Wang, Guiting Zhao, Zhongshun Yao, Zhihong Niu, Wei He
Summary: The study investigated the expression profile, clinical significance, and prognostic value of HDAC family members in ccRCC using TCGA, ICGC, and HPA databases, revealing HDAC8, HDAC10, and HDAC11 as potential molecular biomarkers with clinical value for prognosis in ccRCC. The correlation analyses also suggest underlying molecular mechanisms that deserve further investigation for ccRCC.
Article
Biochemistry & Molecular Biology
Maria Rosaria Muroni, Silvia Ribback, Giovanni Sotgiu, Nils Kroeger, Laura Saderi, Andrea Angius, Paolo Cossu-Rocca, Maria Rosaria De Miglio
Summary: EGFR is commonly overexpressed in CCRCC, but its association with responsiveness to EGFR-targeted therapy and prognostic significance remain controversial. The study suggests that membranous-cytoplasmic EGFR expression correlates with grade, pT stage, SSIGN score, while nuclear EGFR expression does not show significant correlations with clinic-pathological features. Positive expression of nuclear EGFR and SGLT1 is associated with increased survival rate in CCRCC patients.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2021)
Review
Urology & Nephrology
Brittney H. Cotta, Toni K. Choueiri, Marcin Cieslik, Pooja Ghatalia, Rohit Mehra, Todd M. Morgan, Ganesh S. Palapattu, Brian Shuch, Ulka Vaishampayan, Eliezer Van Allen, Ari Hakimi, Simpa S. Salami
Summary: Substantial progress has been made in the understanding of the molecular biology of clear cell renal cell carcinoma (ccRCC), providing a foundation for clinical translation. This review examines the clinically impactful data surrounding genomic biomarkers in ccRCC, focusing on studies assessing clinical outcomes. The use of tumor sequencing techniques has led to the discovery of multiple candidate genomic biomarkers, including gene mutations, copy number variations, multigene signatures, and immune cell populations. Further research is needed to refine and validate these tools for risk stratification and improve patient care.
Article
Immunology
Mancheng Gong, Yongxiang Li, Erlin Song, Miaoyuan Li, Shaopeng Qiu, Wenjing Dong, Runqiang Yuan
Summary: Our study found a correlation between OIP5 expression and immune cell infiltration level in ccRCC. Analysis based on RNA-seq data showed that OIP5 has an impact on immune activity. Additionally, OIP5 was associated with several immunomodulators and involved in multiple immune signaling pathways. We constructed a multiple-gene risk prediction signature, providing a potential target for immunotherapy in ccRCC.
FRONTIERS IN IMMUNOLOGY
(2022)
Article
Oncology
Qianwei Xing, Tengyue Zeng, Shouyong Liu, Hong Cheng, Limin Ma, Yi Wang
Summary: A novel signature based on 10 prognostic GRGs was successfully established and externally and internally validated for predicting OS of ccRCC, assisting clinicians in better predicting patients' survival.
Article
Genetics & Heredity
Ji Chen, Qiqi Tao, Zhichao Lang, Yan Jin, Guanqi Chen, Xinling Li, Zhixian Yu, Yeping Li
Summary: The N-Score was found to be a potential independent risk factor in ccRCC patients, associated with tumor mutational burden and immune cell infiltration characteristics, as well as significantly correlated with molecular drug sensitivity and immune checkpoint activity.
FRONTIERS IN GENETICS
(2022)
Article
Biochemistry & Molecular Biology
Zijian Tian, Lingfeng Meng, Xin Wang, Tongxiang Diao, Maolin Hu, Miao Wang, Yaqun Zhang, Ming Liu, Jianye Wang
Summary: This study screened and verified important prognostic genes related to clear cell renal cell carcinoma (ccRCC) and analyzed their relationship with the immune microenvironment. CGN was identified as a diagnostic and prognostic biomarker for ccRCC and is associated with the immune microenvironment.
FRONTIERS IN MOLECULAR BIOSCIENCES
(2022)
Article
Genetics & Heredity
You Zuo, Shuai Fu, Zhongwei Zhao, Zeyan Li, Yijian Wu, Tienan Qi, Jianguo Zheng, Qinglong Du, Zhonghua Xu, Nengwang Yu
Summary: This study constructed a sarcomatoid-associated gene risk index (SAGRI) to predict the prognosis of renal cell carcinoma and found that SAGRI has a high predictive power. The study also suggested that the SAGRI-HIGH subgroup may benefit from immunotherapy.
FRONTIERS IN GENETICS
(2022)
Article
Genetics & Heredity
Man-Gang Lee, Yung-Kuo Lee, Shih-Chung Huang, Chen-Lin Chang, Chou-Yuan Ko, Wen-Chin Lee, Tung-Yuan Chen, Shiow-Jyu Tzou, Cheng-Yi Huang, Ming-Hong Tai, Yu-Wei Lin, Mei-Lang Kung, Ming-Chao Tsai, Yung-Lung Chen, Yi-Chen Chang, Zhi-Hong Wen, Chao-Cheng Huang, Tian-Huei Chu
Summary: This study uses bioinformatics analysis to investigate the role of DLK2 in ccRCC. The results suggest that DLK2 may serve as a novel biomarker and therapeutic target for ccRCC.
Article
Biotechnology & Applied Microbiology
Zuhu Yu, Chong Lu, Bin Lu, Hong Gao, Rongfang Liang, Wuxing Xiang
Summary: This study identified necroptosis-related microRNAs (miRNAs) associated with the prognosis of clear cell renal cell carcinoma (ccRCC), and developed a prognostic signature to predict overall survival in ccRCC patients. The targeted genes of these miRNAs were predicted using miRNA databases, and their functional and pathway associations with ccRCC prognosis were investigated. The differential expression of the three miRNAs in the signature was validated in ccRCC tissues.
Article
Multidisciplinary Sciences
Na Li, Jie Chen, Qiang Liu, Hongyi Qu, Xiaoqing Yang, Peng Gao, Yao Wang, Huayu Gao, Hong Wang, Zuohui Zhao
Summary: Phosphorylated mTOR was identified as an independent predictor of poor survival, and mTOR was associated with tumor immune infiltrates in ccRCC patients, validating the potential involvement of mTOR in the initiation and progression of ccRCC.