Host and non-host roots in rice: cellular and molecular approaches reveal differential responses to arbuscular mycorrhizal fungi

Network of GRAS Transcription Factors Involved in the Control of Arbuscule Development inLotus japonicus

(2015) Li Xue et al.   PLANT PHYSIOLOGY

Transcriptome diversity among rice root types during asymbiosis and interaction with arbuscular mycorrhizal fungi

(2015) Caroline Gutjahr et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Arbuscular mycorrhizal dialogues: do you speak ‘plantish’ or ‘fungish’?

(2015) Paola Bonfante et al.   TRENDS IN PLANT SCIENCE

HTSeq--a Python framework to work with high-throughput sequencing data

(2014) S. Anders et al.   BIOINFORMATICS

From root to fruit: RNA-Seq analysis shows that arbuscular mycorrhizal symbiosis may affect tomato fruit metabolism

(2014) Inès Zouari et al.   BMC GENOMICS

Signaling events during initiation of arbuscular mycorrhizal symbiosis

(2014) Alexa M. Schmitz et al.   Journal of Integrative Plant Biology

A H+-ATPase That Energizes Nutrient Uptake during Mycorrhizal Symbioses in Rice and Medicago truncatula

(2014) E. Wang et al.   PLANT CELL

Gibberellins Interfere with Symbiosis Signaling and Gene Expression and Alter Colonization by Arbuscular Mycorrhizal Fungi inLotus japonicus

(2014) Naoya Takeda et al.   PLANT PHYSIOLOGY

Effector MiSSP7 of the mutualistic fungus Laccaria bicolor stabilizes the Populus JAZ6 protein and represses jasmonic acid (JA) responsive genes

(2014) J. M. Plett et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Natural variation of rice strigolactone biosynthesis is associated with the deletion of twoMAX1orthologs

(2014) Catarina Cardoso et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Plant hormones in arbuscular mycorrhizal symbioses: an emerging role for gibberellins

(2013) Eloise Foo et al.   ANNALS OF BOTANY

Cell and Developmental Biology of Arbuscular Mycorrhiza Symbiosis

(2013) Caroline Gutjahr et al.   Annual Review of Cell and Developmental Biology

Automated analysis of calcium spiking profiles with CaSA software: two case studies from root-microbe symbioses

(2013) Giulia Russo et al.   BMC PLANT BIOLOGY

A DELLA protein complex controls the arbuscular mycorrhizal symbiosis in plants

(2013) Nan Yu et al.   CELL RESEARCH

Identification of SHRUBBY, a SHORT-ROOT and SCARECROW interacting protein that controls root growth and radial patterning

(2013) K. Koizumi et al.   DEVELOPMENT

An evidence-based consensus for the classification of arbuscular mycorrhizal fungi (Glomeromycota)

(2013) Dirk Redecker et al.   MYCORRHIZA

Speak, friend and enter: signalling systems that promote beneficial symbiotic associations in plants

(2013) Giles E. D. Oldroyd   NATURE REVIEWS MICROBIOLOGY

Arbuscular mycorrhizal fungi reduce growth and infect roots of the non-host plantArabidopsis thaliana

(2013) RITA S. L. VEIGA et al.   PLANT CELL AND ENVIRONMENT

Rice flooding negatively impacts root branching and arbuscular mycorrhizal colonization, but not fungal viability

(2013) MARTA VALLINO et al.   PLANT CELL AND ENVIRONMENT

Interactions between arbuscular mycorrhizal and non-mycorrhizal plants: do non-mycorrhizal species at both extremes of nutrient availability play the same game?

(2013) HANS LAMBERS et al.   PLANT CELL AND ENVIRONMENT

Mercator: a fast and simple web server for genome scale functional annotation of plant sequence data

(2013) MARC LOHSE et al.   PLANT CELL AND ENVIRONMENT

Maize Root Lectins Mediate the Interaction with Herbaspirillum seropedicae via N-Acetyl Glucosamine Residues of Lipopolysaccharides

(2013) Eduardo Balsanelli et al.   PLoS One

CYP714B1 and CYP714B2 encode gibberellin 13-oxidases that reduce gibberellin activity in rice

(2013) H. Magome et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

DELLA proteins regulate arbuscule formation in arbuscular mycorrhizal symbiosis

(2013) D. S. Floss et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Evolution of the plant–microbe symbiotic ‘toolkit’

(2013) Pierre-Marc Delaux et al.   TRENDS IN PLANT SCIENCE

Multiple control levels of root system remodeling in arbuscular mycorrhizal symbiosis

(2013) Caroline Gutjahr et al.   Frontiers in Plant Science

A GRAS-Type Transcription Factor with a Specific Function in Mycorrhizal Signaling

(2012) Enrico Gobbato et al.   CURRENT BIOLOGY

A Common Signaling Process that Promotes Mycorrhizal and Oomycete Colonization of Plants

(2012) Ertao Wang et al.   CURRENT BIOLOGY

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

(2012) Cole Trapnell et al.   Nature Protocols

Nonredundant Regulation of Rice Arbuscular Mycorrhizal Symbiosis by Two Members of thePHOSPHATE TRANSPORTER1Gene Family

(2012) Shu-Yi Yang et al.   PLANT CELL

An AM-induced,MYB-family gene ofLotus japonicus(LjMAMI) affects root growth in an AM-independent manner

(2012) Veronica Volpe et al.   PLANT JOURNAL

Rhizobial and Mycorrhizal Symbioses in Lotus japonicus Require Lectin Nucleotide Phosphohydrolase, Which Acts Upstream of Calcium Signaling

(2012) N. J. Roberts et al.   PLANT PHYSIOLOGY

Comparative Transcriptome Profiling of the Early Response to Magnaporthe oryzae in Durable Resistant vs Susceptible Rice (Oryza sativa L.) Genotypes

(2012) Paolo Bagnaresi et al.   PLoS One

A Secreted Fungal Effector of Glomus intraradices Promotes Symbiotic Biotrophy

(2011) Silke Kloppholz et al.   CURRENT BIOLOGY

Dating in the dark: how roots respond to fungal signals to establish arbuscular mycorrhizal symbiosis

(2011) Paola Bonfante et al.   CURRENT OPINION IN PLANT BIOLOGY

Expression analysis of the nucleocytoplasmic lectin ‘Orysata’ from rice in Pichia pastoris

(2011) Bassam Al Atalah et al.   FEBS Journal

GintAMT2, a new member of the ammonium transporter family in the arbuscular mycorrhizal fungus Glomus intraradices

(2011) Jacob Pérez-Tienda et al.   FUNGAL GENETICS AND BIOLOGY

A jacalin-related lectin-like gene in wheat is a component of the plant defence system

(2011) Yang Xiang et al.   JOURNAL OF EXPERIMENTAL BOTANY

Phylogenetic reference data for systematics and phylotaxonomy of arbuscular mycorrhizal fungi from phylum to species level

(2011) Manuela Krüger et al.   NEW PHYTOLOGIST

The half-size ABC transporters STR1 and STR2 are indispensable for mycorrhizal arbuscule formation in rice

(2011) Caroline Gutjahr et al.   PLANT JOURNAL

Hormonal and transcriptional profiles highlight common and differential host responses to arbuscular mycorrhizal fungi and the regulation of the oxylipin pathway

(2010) Juan A. López-Ráez et al.   JOURNAL OF EXPERIMENTAL BOTANY

Activation of basal defense mechanisms of rice plants by Glomus intraradices does not affect the arbuscular mycorrhizal symbiosis

(2010) Lidia Campos-Soriano et al.   NEW PHYTOLOGIST

Genetic control of root development in rice, the model cereal

(2010) Yoan Coudert et al.   TRENDS IN PLANT SCIENCE

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

Overexpression of a wheat jasmonate-regulated lectin increases pathogen resistance

(2009) Qing-Hu Ma et al.   BIOCHIMIE

Transcript length bias in RNA-seq data confounds systems biology

(2009) Alicia Oshlack et al.   Biology Direct

Glomus intraradicesinduces changes in root system architecture of rice independently of common symbiosis signaling

(2009) Caroline Gutjahr et al.   NEW PHYTOLOGIST

Genome-wide reprogramming of regulatory networks, transport, cell wall and membrane biogenesis during arbuscular mycorrhizal symbiosis in Lotus japonicus

(2009) Mike Guether et al.   NEW PHYTOLOGIST

Arbuscular Mycorrhiza-Specific Signaling in Rice Transcends the Common Symbiosis Signaling Pathway

(2008) C. Gutjahr et al.   PLANT CELL

Plants and arbuscular mycorrhizal fungi: an evolutionary-developmental perspective

(2008) Paola Bonfante et al.   TRENDS IN PLANT SCIENCE

Molecular Genetics of Rice Root Development

(2008) J. Rebouillat et al.   Rice

Conserved and diverse mechanisms in root development

(2007) Frank Hochholdinger et al.   CURRENT OPINION IN PLANT BIOLOGY