Plastid genomics in horticultural species: importance and applications for plant population genetics, evolution, and biotechnology
Published 2015 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Plastid genomics in horticultural species: importance and applications for plant population genetics, evolution, and biotechnology
Authors
Keywords
-
Journal
Frontiers in Plant Science
Volume 6, Issue -, Pages -
Publisher
Frontiers Media SA
Online
2015-08-10
DOI
10.3389/fpls.2015.00586
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Engineering Plastid Genomes: Methods, Tools, and Applications in Basic Research and Biotechnology
- (2015) Ralph Bock Annual Review of Plant Biology
- Comparative analysis of microsatellites in chloroplast genomes of lower and higher plants
- (2015) Biju George et al. CURRENT GENETICS
- Full crop protection from an insect pest by expression of long double-stranded RNAs in plastids
- (2015) Jiang Zhang et al. SCIENCE
- Complete chloroplast genome of the orchid Cattleya crispata (Orchidaceae:Laeliinae), a Neotropical rupiculous species
- (2015) Violeta da Rocha Perini et al. Mitochondrial DNA Part A
- Division and Dynamic Morphology of Plastids
- (2014) Katherine W. Osteryoung et al. Annual Review of Plant Biology
- Why are most organelle genomes transmitted maternally?
- (2014) Stephan Greiner et al. BIOESSAYS
- Thirteen Camellia chloroplast genome sequences determined by high-throughput sequencing: genome structure and phylogenetic relationships
- (2014) Hui Huang et al. BMC EVOLUTIONARY BIOLOGY
- Endosymbiotic theory for organelle origins
- (2014) Verena Zimorski et al. CURRENT OPINION IN MICROBIOLOGY
- Two Distinct Plastid Genome Configurations and Unprecedented Intraspecies Length Variation in the accD Coding Region in Medicago truncatula
- (2014) C. Gurdon et al. DNA RESEARCH
- A trnI_CAU Triplication Event in the Complete Chloroplast Genome of Paris verticillata M.Bieb. (Melanthiaceae, Liliales)
- (2014) Hoang Dang Khoa Do et al. Genome Biology and Evolution
- Oral Delivery of Angiotensin-Converting Enzyme 2 and Angiotensin-(1-7) Bioencapsulated in Plant Cells Attenuates Pulmonary Hypertension
- (2014) Vinayak Shenoy et al. HYPERTENSION
- The Translational Apparatus of Plastids and Its Role in Plant Development
- (2014) Nadine Tiller et al. Molecular Plant
- Oral Delivery of ACE2/Ang-(1–7) Bioencapsulated in Plant Cells Protects against Experimental Uveitis and Autoimmune Uveoretinitis
- (2014) Pollob K Shil et al. MOLECULAR THERAPY
- Horizontal genome transfer as an asexual path to the formation of new species
- (2014) Ignacia Fuentes et al. NATURE
- Evolutionary and biotechnology implications of plastid genome variation in the inverted-repeat-lacking clade of legumes
- (2014) Jamal Sabir et al. PLANT BIOTECHNOLOGY JOURNAL
- TransplastomicNicotiana benthamianaplants expressing multiple defence genes encoding protease inhibitors and chitinase display broad-spectrum resistance against insects, pathogens and abiotic stresses
- (2014) Peng-Jen Chen et al. PLANT BIOTECHNOLOGY JOURNAL
- Chloroplast DNA in Mature and Senescing Leaves: A Reappraisal
- (2014) Hieronim Golczyk et al. PLANT CELL
- A Plastid without a Genome: Evidence from the Nonphotosynthetic Green Algal Genus Polytomella
- (2014) D. R. Smith et al. PLANT PHYSIOLOGY
- The Complete Chloroplast Genome Sequence of Podocarpus lambertii: Genome Structure, Evolutionary Aspects, Gene Content and SSR Detection
- (2014) Leila do Nascimento Vieira et al. PLoS One
- An Improved Protocol for Intact Chloroplasts and cpDNA Isolation in Conifers
- (2014) Leila do Nascimento Vieira et al. PLoS One
- A Chloroplast Retrograde Signal Regulates Nuclear Alternative Splicing
- (2014) E. Petrillo et al. SCIENCE
- Low frequency paternal transmission of plastid genes in Brassicaceae
- (2014) Anja Schneider et al. TRANSGENIC RESEARCH
- Dynamic composition, shaping and organization of plastid nucleoids
- (2014) Marta Powikrowska et al. Frontiers in Plant Science
- WHIRLY1 is a major organizer of chloroplast nucleoids
- (2014) Karin Krupinska et al. Frontiers in Plant Science
- The role of photosynthesis and amino acid metabolism in the energy status during seed development
- (2014) Gad Galili et al. Frontiers in Plant Science
- A Review of the Prevalence, Utility, and Caveats of Using Chloroplast Simple Sequence Repeats for Studies of Plant Biology
- (2014) Gregory L. Wheeler et al. Applications in Plant Sciences
- Intracellular Signaling from Plastid to Nucleus
- (2013) Wei Chi et al. Annual Review of Plant Biology
- The Number, Speed, and Impact of Plastid Endosymbioses in Eukaryotic Evolution
- (2013) Patrick J. Keeling Annual Review of Plant Biology
- Dengue virus tetra-epitope peptide expressed in lettuce chloroplasts for potential use in dengue diagnosis
- (2013) Franciele Roberta Maldaner et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- Tuning a ménage à trois: Co-evolution and co-adaptation of nuclear and organellar genomes in plants
- (2013) Stephan Greiner et al. BIOESSAYS
- Complete chloroplast genome of the genus Cymbidium: lights into the species identification, phylogenetic implications and population genetic analyses
- (2013) Jun-Bo Yang et al. BMC EVOLUTIONARY BIOLOGY
- Organelle transcriptomes: products of a deconstructed genome
- (2013) Ian D Small et al. CURRENT OPINION IN MICROBIOLOGY
- Using diversity of the chloroplast genome to examine evolutionary history of wheat species
- (2013) Fiona J. Leigh et al. GENETIC RESOURCES AND CROP EVOLUTION
- The Complete Chloroplast Genome Sequence of Cephalotaxus oliveri (Cephalotaxaceae): Evolutionary Comparison of Cephalotaxus Chloroplast DNAs and Insights into the Loss of Inverted Repeat Copies in Gymnosperms
- (2013) Xuan Yi et al. Genome Biology and Evolution
- Chloroplast-targeted expression of recombinant crystal-protein gene in cotton: An unconventional combat with resistant pests
- (2013) Sarfraz Kiani et al. JOURNAL OF BIOTECHNOLOGY
- Chloroplast genome analysis of Australian eucalypts – Eucalyptus, Corymbia, Angophora, Allosyncarpia and Stockwellia (Myrtaceae)
- (2013) Michael J. Bayly et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- The Norway spruce genome sequence and conifer genome evolution
- (2013) Björn Nystedt et al. NATURE
- Photosynthetic gene expression in higher plants
- (2013) James O. Berry et al. PHOTOSYNTHESIS RESEARCH
- Highly rearranged and size-variable chloroplast genomes in conifers II clade (cupressophytes): evolution towards shorter intergenic spacers
- (2013) Chung-Shien Wu et al. PLANT BIOTECHNOLOGY JOURNAL
- Precise excision of plastid DNA by the large serine recombinase Bxb1
- (2013) Min Shao et al. PLANT BIOTECHNOLOGY JOURNAL
- Strategies for metabolic pathway engineering with multiple transgenes
- (2013) Ralph Bock PLANT MOLECULAR BIOLOGY
- How can plant genetic engineering contribute to cost-effective fish vaccine development for promoting sustainable aquaculture?
- (2013) Jihong Liu Clarke et al. PLANT MOLECULAR BIOLOGY
- Expression of Fungal Cutinase and Swollenin in Tobacco Chloroplasts Reveals Novel Enzyme Functions and/or Substrates
- (2013) Dheeraj Verma et al. PLoS One
- The Complete Chloroplast Genome Sequence of the Medicinal Plant Salvia miltiorrhiza
- (2013) Jun Qian et al. PLoS One
- Complete Chloroplast Genome Sequences of Mongolia Medicine Artemisia frigida and Phylogenetic Relationships with Other Plants
- (2013) Yue Liu et al. PLoS One
- The Complete Chloroplast Genome of Banana (Musa acuminata, Zingiberales): Insight into Plastid Monocotyledon Evolution
- (2013) Guillaume Martin et al. PLoS One
- Release of Proteins from Intact Chloroplasts Induced by Reactive Oxygen Species during Biotic and Abiotic Stress
- (2013) Kwang-Chul Kwon et al. PLoS One
- Efficient metabolic pathway engineering in transgenic tobacco and tomato plastids with synthetic multigene operons
- (2013) Y. Lu et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Genetic variation in wild Prunus L. subgen. Cerasus germplasm from Iran characterized by nuclear and chloroplast SSR markers
- (2013) Abdollah Khadivi-Khub et al. TREES-STRUCTURE AND FUNCTION
- Mechanism of oral tolerance induction to therapeutic proteins
- (2012) Xiaomei Wang et al. ADVANCED DRUG DELIVERY REVIEWS
- Chloroplast transformation for engineering of photosynthesis
- (2012) Maureen R. Hanson et al. JOURNAL OF EXPERIMENTAL BOTANY
- Insights into phylogeny, sex function and age of Fragaria based on whole chloroplast genome sequencing
- (2012) Wambui Njuguna et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- Fortifying plants with the essential amino acids lysine and methionine to improve nutritional quality
- (2012) Gad Galili et al. PLANT BIOTECHNOLOGY JOURNAL
- Identification ofcis-elements conferring high levels of gene expression in non-green plastids
- (2012) Jiang Zhang et al. PLANT JOURNAL
- Design of chimeric expression elements that confer high-level gene activity in chromoplasts
- (2012) Rodrigo Caroca et al. PLANT JOURNAL
- The Plastid Genome-Encoded Ycf4 Protein Functions as a Nonessential Assembly Factor for Photosystem I in Higher Plants
- (2012) K. Krech et al. PLANT PHYSIOLOGY
- Plastid Proteostasis and Heterologous Protein Accumulation in Transplastomic Plants
- (2012) F. De Marchis et al. PLANT PHYSIOLOGY
- Does the Mode of Plastid Inheritance Influence Plastid Genome Architecture?
- (2012) Kate Crosby et al. PLoS One
- Horizontal transfer of chloroplast genomes between plant species
- (2012) S. Stegemann et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Inheritance and genetic mapping of two nuclear genes involved in nuclear–cytoplasmic incompatibility in peas (Pisum sativum L.)
- (2012) Vera S. Bogdanova et al. THEORETICAL AND APPLIED GENETICS
- Improvement of vitamin E quality and quantity in tobacco and lettuce by chloroplast genetic engineering
- (2012) Yukinori Yabuta et al. TRANSGENIC RESEARCH
- The Contributions of Wobbling and Superwobbling to the Reading of the Genetic Code
- (2012) Sibah Alkatib et al. PLoS Genetics
- Determination of the melon chloroplast and mitochondrial genome sequences reveals that the largest reported mitochondrial genome in plants contains a significant amount of DNA having a nuclear origin
- (2011) Luis Rodríguez-Moreno et al. BMC GENOMICS
- Genomic profiling of plastid DNA variation in the Mediterranean olive tree
- (2011) Guillaume Besnard et al. BMC PLANT BIOLOGY
- Gene flow among wild and domesticated almond species: insights from chloroplast and nuclear markers
- (2011) Malou Delplancke et al. Evolutionary Applications
- Complete chloroplast genome sequence of Magnolia kwangsiensis (Magnoliaceae): implication for DNA barcoding and population genetics
- (2011) Dai-Yong Kuang et al. GENOME
- The role of plastids in plant speciation
- (2011) STEPHAN GREINER et al. MOLECULAR ECOLOGY
- Combining chloroplast and nuclear microsatellites to investigate origin and dispersal of New World sweet potato landraces
- (2011) C. ROULLIER et al. MOLECULAR ECOLOGY
- Pinellia ternata agglutinin expression in chloroplasts confers broad spectrum resistance against aphid, whitefly, Lepidopteran insects, bacterial and viral pathogens
- (2011) Shuangxia Jin et al. PLANT BIOTECHNOLOGY JOURNAL
- Optimization of the expression of the HIV fusion inhibitor cyanovirin-N from the tobacco plastid genome
- (2011) Zouhair Elghabi et al. PLANT BIOTECHNOLOGY JOURNAL
- Metallothionein expression in chloroplasts enhances mercury accumulation and phytoremediation capability
- (2011) Oscar N. Ruiz et al. PLANT BIOTECHNOLOGY JOURNAL
- Engineering plastid fatty acid biosynthesis to improve food quality and biofuel production in higher plants
- (2011) Marcelo Rogalski et al. PLANT BIOTECHNOLOGY JOURNAL
- Chloroplast genomes of photosynthetic eukaryotes
- (2011) Beverley R. Green PLANT JOURNAL
- High-level expression of a suite of thermostable cell wall-degrading enzymes from the chloroplast genome
- (2011) Kerstin Petersen et al. PLANT MOLECULAR BIOLOGY
- Plastid biotechnology for crop production: present status and future perspectives
- (2011) Jihong Liu Clarke et al. PLANT MOLECULAR BIOLOGY
- Plastid Biotechnology: Food, Fuel, and Medicine for the 21st Century
- (2011) P. Maliga et al. PLANT PHYSIOLOGY
- Transformation of Solanum tuberosum plastids allows high expression levels of β-glucuronidase both in leaves and microtubers developed in vitro
- (2011) María Eugenia Segretin et al. PLANTA
- Expression of Trichoderma reesei β-Mannanase in Tobacco Chloroplasts and Its Utilization in Lignocellulosic Woody Biomass Hydrolysis
- (2011) Pankaj Agrawal et al. PLoS One
- Complete chloroplast genome sequence of rapeseed (Brassica napus L.) and its evolutionary implications
- (2010) Zhi-Yong Hu et al. GENETIC RESOURCES AND CROP EVOLUTION
- Mechanisms for independent cytoplasmic inheritance of mitochondria and plastids in angiosperms
- (2010) Noriko Nagata JOURNAL OF PLANT RESEARCH
- 100 years since the discovery of non-Mendelian plastid phenotypes
- (2010) Tsuneyoshi Kuroiwa JOURNAL OF PLANT RESEARCH
- Why does biparental plastid inheritance revive in angiosperms?
- (2010) Quan Zhang et al. JOURNAL OF PLANT RESEARCH
- Complete Plastid Genome Sequences of Three Rosids (Castanea, Prunus, Theobroma): Evidence for At Least Two Independent Transfers of rpl22 to the Nucleus
- (2010) R. K. Jansen et al. MOLECULAR BIOLOGY AND EVOLUTION
- The genome of woodland strawberry (Fragaria vesca)
- (2010) Vladimir Shulaev et al. NATURE GENETICS
- Chromoplast Differentiation: Current Status and Perspectives
- (2010) I. Egea et al. PLANT AND CELL PHYSIOLOGY
- Chloroplast genome sequences from total DNA for plant identification
- (2010) Catherine J. Nock et al. PLANT BIOTECHNOLOGY JOURNAL
- Low-cost production of proinsulin in tobacco and lettuce chloroplasts for injectable or oral delivery of functional insulin and C-peptide
- (2010) Diane Boyhan et al. PLANT BIOTECHNOLOGY JOURNAL
- Identification of protein stability determinants in chloroplasts
- (2010) Wiebke Apel et al. PLANT JOURNAL
- Whole genome sequencing of enriched chloroplast DNA using the Illumina GAII platform
- (2010) Robin A Atherton et al. Plant Methods
- Chloramphenicol acetyltransferase as selectable marker for plastid transformation
- (2010) Weimin Li et al. PLANT MOLECULAR BIOLOGY
- Release of Hormones from Conjugates: Chloroplast Expression of -Glucosidase Results in Elevated Phytohormone Levels Associated with Significant Increase in Biomass and Protection from Aphids or Whiteflies Conferred by Sucrose Esters
- (2010) S. Jin et al. PLANT PHYSIOLOGY
- The Role of Heterologous Chloroplast Sequence Elements in Transgene Integration and Expression
- (2010) T. Ruhlman et al. PLANT PHYSIOLOGY
- Host density drives the postglacial migration of the tree parasite, Epifagus virginiana
- (2010) Y.-H. E. Tsai et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Phylogenetic analysis of 83 plastid genes further resolves the early diversification of eudicots
- (2010) M. J. Moore et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- High efficiency plastid transformation in potato and regulation of transgene expression in leaves and tubers by alternative 5′ and 3′ regulatory sequences
- (2010) Vladimir T. Valkov et al. TRANSGENIC RESEARCH
- Novel BacterialN-Acetyltransferase Gene for Herbicide Detoxification in Land Plants and Selection Maker in Plant Transformation
- (2009) Choong-Soo YUN et al. BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY
- Increasing phylogenetic resolution at low taxonomic levels using massively parallel sequencing of chloroplast genomes
- (2009) Matthew Parks et al. BMC BIOLOGY
- The Puzzle of Plastid Evolution
- (2009) John M. Archibald CURRENT BIOLOGY
- Genetic engineering to enhance mercury phytoremediation
- (2009) Oscar N Ruiz et al. CURRENT OPINION IN BIOTECHNOLOGY
- The Chloroplast Genome Sequence of Mungbean (Vigna radiata) Determined by High-throughput Pyrosequencing: Structural Organization and Phylogenetic Relationships
- (2009) S. Tangphatsornruang et al. DNA RESEARCH
- Tobacco plastid transformation using the feedback-insensitive anthranilate synthase [ ]-subunit of tobacco (ASA2) as a new selectable marker
- (2009) P. Barone et al. JOURNAL OF EXPERIMENTAL BOTANY
- Codon optimization of cry1Ab gene for hyper expression in plant organelles
- (2009) Rasheda Jabeen et al. MOLECULAR BIOLOGY REPORTS
- Enhancement of Carotenoid Biosynthesis in Transplastomic Tomatoes by Induced Lycopene-to-Provitamin A Conversion
- (2009) W. Apel et al. PLANT PHYSIOLOGY
- Genome-Wide Analysis of Plastid Gene Expression in Potato Leaf Chloroplasts and Tuber Amyloplasts: Transcriptional and Posttranscriptional Control
- (2009) V. T. Valkov et al. PLANT PHYSIOLOGY
- Plastid production of protein antibiotics against pneumonia via a new strategy for high-level expression of antimicrobial proteins
- (2009) M. Oey et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Plastid transformation in eggplant (Solanum melongena L.)
- (2009) A. K. Singh et al. TRANSGENIC RESEARCH
- Plant-made vaccine antigens and biopharmaceuticals
- (2009) Henry Daniell et al. TRENDS IN PLANT SCIENCE
- Instability of Plastid DNA in the Nuclear Genome
- (2009) Anna E. Sheppard et al. PLoS Genetics
- Plastid Evolution
- (2008) Sven B. Gould et al. Annual Review of Plant Biology
- DNA Transfer from Organelles to the Nucleus: The Idiosyncratic Genetics of Endosymbiosis
- (2008) Tatjana Kleine et al. Annual Review of Plant Biology
- Reconstructing evolution: Gene transfer from plastids to the nucleus
- (2008) Ralph Bock et al. BIOESSAYS
- Complete nucleotide sequence of the Cryptomeria japonica D. Don. chloroplast genome and comparative chloroplast genomics: diversified genomic structure of coniferous species
- (2008) Tomonori Hirao et al. BMC PLANT BIOLOGY
- The Mitochondrial Proteome: From Inventory to Function
- (2008) Chris Meisinger et al. CELL
- Extensive Reorganization of the Plastid Genome of Trifolium subterraneum (Fabaceae) Is Associated with Numerous Repeated Sequences and Novel DNA Insertions
- (2008) Zhengqiu Cai et al. JOURNAL OF MOLECULAR EVOLUTION
- Nuclear and chloroplast microsatellite diversity in Phaseolus vulgaris L. from Sardinia (Italy)
- (2008) S. A. Angioi et al. MOLECULAR BREEDING
- Superwobbling facilitates translation with reduced tRNA sets
- (2008) Marcelo Rogalski et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- The complete nucleotide sequences of the five genetically distinct plastid genomes of Oenothera , subsection Oenothera : I. Sequence evaluation and plastome evolution †
- (2008) Stephan Greiner et al. NUCLEIC ACIDS RESEARCH
- Multiplex sequencing of plant chloroplast genomes using Solexa sequencing-by-synthesis technology
- (2008) Richard Cronn et al. NUCLEIC ACIDS RESEARCH
- Translational control of photosynthetic gene expression in phototrophic eukaryotes
- (2008) Lutz Wobbe et al. PHYSIOLOGIA PLANTARUM
- Development and use of chloroplast microsatellites inPhaseolusspp. and other legumes
- (2008) S. A. Angioi et al. PLANT BIOLOGY
- Plastid Transcriptomics and Translatomics of Tomato Fruit Development and Chloroplast-to-Chromoplast Differentiation: Chromoplast Gene Expression Largely Serves the Production of a Single Protein
- (2008) S. Kahlau et al. PLANT CELL
- Biosynthesis of astaxanthin in tobacco leaves by transplastomic engineering
- (2008) Tomohisa Hasunuma et al. PLANT JOURNAL
- Expression of a Bacillus thuringiensis toxin (cry1Ab) gene in cabbage (Brassica oleracea L. var. capitata L.) chloroplasts confers high insecticidal efficacy against Plutella xylostella
- (2008) Cheng-Wei Liu et al. THEORETICAL AND APPLIED GENETICS
- Genetic analysis of nuclear-cytoplasmic incompatibility in pea associated with cytoplasm of an accession of wild subspecies Pisum sativum subsp. elatius (Bieb.) Schmahl.
- (2008) Vera S. Bogdanova et al. THEORETICAL AND APPLIED GENETICS
- Genetic transformation of the sugar beet plastome
- (2008) Francesca De Marchis et al. TRANSGENIC RESEARCH
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreDiscover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversation