The composition of the global and feature specific cyanobacterial core-genomes
Published 2015 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
The composition of the global and feature specific cyanobacterial core-genomes
Authors
Keywords
-
Journal
Frontiers in Microbiology
Volume 6, Issue -, Pages -
Publisher
Frontiers Media SA
Online
2015-03-19
DOI
10.3389/fmicb.2015.00219
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Comparative genomics of nucleotide metabolism: a tour to the past of the three cellular domains of life
- (2014) Dagoberto Armenta-Medina et al. BMC GENOMICS
- Subcellular Localization and Clues for the Function of the HetN Factor Influencing Heterocyst Distribution in Anabaena sp. Strain PCC 7120
- (2014) L. Corrales-Guerrero et al. JOURNAL OF BACTERIOLOGY
- Natural strategies for photosynthetic light harvesting
- (2014) Roberta Croce et al. Nature Chemical Biology
- Metabolic design for cyanobacterial chemical synthesis
- (2014) John W. K. Oliver et al. PHOTOSYNTHESIS RESEARCH
- Potential of industrial biotechnology with cyanobacteria and eukaryotic microalgae
- (2013) René H Wijffels et al. CURRENT OPINION IN BIOTECHNOLOGY
- MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
- (2013) K. Katoh et al. MOLECULAR BIOLOGY AND EVOLUTION
- MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0
- (2013) Koichiro Tamura et al. MOLECULAR BIOLOGY AND EVOLUTION
- Pfam: the protein families database
- (2013) Robert D. Finn et al. NUCLEIC ACIDS RESEARCH
- PATRIC, the bacterial bioinformatics database and analysis resource
- (2013) Alice R. Wattam et al. NUCLEIC ACIDS RESEARCH
- Improving the coverage of the cyanobacterial phylum using diversity-driven genome sequencing
- (2013) P. M. Shih et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The diversity of cyanobacterial metabolism: genome analysis of multiple phototrophic microorganisms
- (2012) Christian Beck et al. BMC GENOMICS
- Environmental conditions that influence toxin biosynthesis in cyanobacteria
- (2012) Brett A. Neilan et al. ENVIRONMENTAL MICROBIOLOGY
- Analysis of the Saccharomyces cerevisiae pan-genome reveals a pool of copy number variants distributed in diverse yeast strains from differing industrial environments
- (2012) B. Dunn et al. GENOME RESEARCH
- Identification of the HetR Recognition Sequence Upstream of hetZ in Anabaena sp. Strain PCC 7120
- (2012) Y. Du et al. JOURNAL OF BACTERIOLOGY
- The Redox-sensing Transcriptional Regulator RexT Controls Expression of Thioredoxin A2 in the CyanobacteriumAnabaenasp. Strain PCC 7120
- (2012) Shigeki Ehira et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Heterocyst differentiation: from single mutants to global approaches
- (2012) Alicia M. Muro-Pastor et al. TRENDS IN MICROBIOLOGY
- First Report of a Toxic Nodularia spumigena (Nostocales/ Cyanobacteria) Bloom in Sub-Tropical Australia. II. Bioaccumulation of Nodularin in Isolated Populations of Mullet (Mugilidae)
- (2012) Ian Stewart et al. International Journal of Environmental Research and Public Health
- Contribution of a Sodium Ion Gradient to Energy Conservation during Fermentation in the Cyanobacterium Arthrospira (Spirulina) maxima CS-328
- (2011) Damian Carrieri et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- PGAP: pan-genomes analysis pipeline
- (2011) Yongbing Zhao et al. BIOINFORMATICS
- Genome fluctuations in cyanobacteria reflect evolutionary, developmental and adaptive traits
- (2011) John Larsson et al. BMC EVOLUTIONARY BIOLOGY
- Directional RNA deep sequencing sheds new light on the transcriptional response of Anabaena sp. strain PCC 7120 to combined-nitrogen deprivation
- (2011) Britt L Flaherty et al. BMC GENOMICS
- WebMGA: a customizable web server for fast metagenomic sequence analysis
- (2011) Sitao Wu et al. BMC GENOMICS
- Algae biofuels: versatility for the future of bioenergy
- (2011) Carla S Jones et al. CURRENT OPINION IN BIOTECHNOLOGY
- Carbon, nitrogen and O2 fluxes associated with the cyanobacterium Nodularia spumigena in the Baltic Sea
- (2011) Helle Ploug et al. ISME Journal
- Identification of an Oxygenic Reaction Center psbADC Operon in the Cyanobacterium Gloeobacter violaceus PCC 7421
- (2011) T. A. Nguyen et al. MOLECULAR BIOLOGY AND EVOLUTION
- Unity in Variety--The Pan-Genome of the Chlamydiae
- (2011) A. Collingro et al. MOLECULAR BIOLOGY AND EVOLUTION
- OPM database and PPM web server: resources for positioning of proteins in membranes
- (2011) Mikhail A. Lomize et al. NUCLEIC ACIDS RESEARCH
- IMG: the integrated microbial genomes database and comparative analysis system
- (2011) V. M. Markowitz et al. NUCLEIC ACIDS RESEARCH
- Chloroplast Omp85 proteins change orientation during evolution
- (2011) M. S. Sommer et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Determining cell shape: adaptive regulation of cyanobacterial cellular differentiation and morphology
- (2011) Shailendra P. Singh et al. TRENDS IN MICROBIOLOGY
- Nitrogen fixation by marine cyanobacteria
- (2011) Jonathan P. Zehr TRENDS IN MICROBIOLOGY
- Is the future blue-green? A review of the current model predictions of how climate change could affect pelagic freshwater cyanobacteria
- (2011) J. Alex Elliott WATER RESEARCH
- Eco-physiological adaptations that favour freshwater cyanobacteria in a changing climate
- (2011) Cayelan C. Carey et al. WATER RESEARCH
- Accelerated Profile HMM Searches
- (2011) Sean R. Eddy PLoS Computational Biology
- Functional and Structural Characterization of the 2/2 Hemoglobin fromSynechococcussp. PCC 7002,
- (2010) Nancy L. Scott et al. BIOCHEMISTRY
- Signature proteins for the major clades of Cyanobacteria
- (2010) Radhey S Gupta et al. BMC EVOLUTIONARY BIOLOGY
- Legionella pneumophila pangenome reveals strain-specific virulence factors
- (2010) Giuseppe D'Auria et al. BMC GENOMICS
- Genomic Structure of an Economically Important Cyanobacterium, Arthrospira (Spirulina) platensis NIES-39
- (2010) T. Fujisawa et al. DNA RESEARCH
- Catabolic Function of Compartmentalized Alanine Dehydrogenase in the Heterocyst-Forming Cyanobacterium Anabaena sp. Strain PCC 7120
- (2010) R. Pernil et al. JOURNAL OF BACTERIOLOGY
- The Genome Sequence of the Cyanobacterium Oscillatoria sp. PCC 6506 Reveals Several Gene Clusters Responsible for the Biosynthesis of Toxins and Secondary Metabolites
- (2010) A. Mejean et al. JOURNAL OF BACTERIOLOGY
- Heterocyst-Specific Transcription of NsiR1, a Non-Coding RNA Encoded in a Tandem Array of Direct Repeats in Cyanobacteria
- (2010) Danny Ionescu et al. JOURNAL OF MOLECULAR BIOLOGY
- The properties of the outer membrane localized Lipid A transporter LptD
- (2010) Raimund Haarmann et al. JOURNAL OF PHYSICS-CONDENSED MATTER
- Nitrogen Fixation and Hydrogen Metabolism in Cyanobacteria
- (2010) H. Bothe et al. MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS
- Ectopic expression of hetP can partially bypass the need for hetR in heterocyst differentiation by Anabaena sp. strain PCC 7120
- (2010) Kelly C. Higa et al. MOLECULAR MICROBIOLOGY
- OMPdb: a database of -barrel outer membrane proteins from Gram-negative bacteria
- (2010) K. D. Tsirigos et al. NUCLEIC ACIDS RESEARCH
- Correction: Genome Erosion in a Nitrogen-Fixing Vertically Transmitted Endosymbiotic Multicellular Cyanobacterium
- (2010) Liang Ran et al. PLoS One
- AlgK Is a TPR-Containing Protein and the Periplasmic Component of a Novel Exopolysaccharide Secretin
- (2010) Carrie-Lynn Keiski et al. STRUCTURE
- Structure and dynamics of the pan-genome of Streptococcus pneumoniae and closely related species
- (2010) Claudio Donati et al. GENOME BIOLOGY
- TonB-dependent transporters and their occurrence in cyanobacteria
- (2009) Oliver Mirus et al. BMC BIOLOGY
- Horizontal transfer of the nitrogen fixation gene cluster in the cyanobacterium Microcoleus chthonoplastes
- (2009) Henk Bolhuis et al. ISME Journal
- The cell wall in heterocyst formation byAnabaenasp. PCC 7120
- (2009) Kerstin Nicolaisen et al. JOURNAL OF BASIC MICROBIOLOGY
- Molecular identification, typing and traceability of cyanobacteria from freshwater reservoirs
- (2009) E. Valerio et al. MICROBIOLOGY-SGM
- Building the sequence map of the human pan-genome
- (2009) Ruiqiang Li et al. NATURE BIOTECHNOLOGY
- Protein structure prediction on the Web: a case study using the Phyre server
- (2009) Lawrence A Kelley et al. Nature Protocols
- Compartmentalized function through cell differentiation in filamentous cyanobacteria
- (2009) Enrique Flores et al. NATURE REVIEWS MICROBIOLOGY
- InParanoid 7: new algorithms and tools for eukaryotic orthology analysis
- (2009) G. Ostlund et al. NUCLEIC ACIDS RESEARCH
- CyanoBase: the cyanobacteria genome database update 2010
- (2009) Mitsuteru Nakao et al. NUCLEIC ACIDS RESEARCH
- Biogeography of the Sulfolobus islandicus pan-genome
- (2009) M. L. Reno et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- A method for discovering transmembrane beta-barrel proteins in Gram-negative bacterial proteomes
- (2008) Jing Hu et al. COMPUTATIONAL BIOLOGY AND CHEMISTRY
- TMBETADISC-RBF: Discrimination of -barrel membrane proteins using RBF networks and PSSM profiles
- (2008) Yu-Yen Ou et al. COMPUTATIONAL BIOLOGY AND CHEMISTRY
- Comparative genomics: the bacterial pan-genome
- (2008) Hervé Tettelin et al. CURRENT OPINION IN MICROBIOLOGY
- DNA Microarray Comparisons of Plant Factor- and Nitrogen Deprivation-Induced Hormogonia Reveal Decision-Making Transcriptional Regulation Patterns in Nostoc punctiforme
- (2008) E. L. Campbell et al. JOURNAL OF BACTERIOLOGY
- Signature Genes as a Phylogenomic Tool
- (2008) B. E. Dutilh et al. MOLECULAR BIOLOGY AND EVOLUTION
- Niche adaptation and genome expansion in the chlorophyll d-producing cyanobacterium Acaryochloris marina
- (2008) W. D. Swingley et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Global transcriptomic analysis of Cyanothece 51142 reveals robust diurnal oscillation of central metabolic processes
- (2008) J. Stockel et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationFind the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
Search