Genome-scale transcriptome analysis of the desert poplar, Populus euphratica

Ionic homeostasis and reactive oxygen species control in leaves and xylem sap of two poplars subjected to NaCl stress

(2011) R. Wang et al.   TREE PHYSIOLOGY

The salt- and drought-inducible poplar GRAS protein SCL7 confers salt and drought tolerance in Arabidopsis thaliana

(2010) Hong-Shuang Ma et al.   JOURNAL OF EXPERIMENTAL BOTANY

Transcriptome profile analysis of floral sex determination in cucumber

(2010) Tao Wu et al.   JOURNAL OF PLANT PHYSIOLOGY

H2O2 and cytosolic Ca2+ signals triggered by the PM H+-coupled transport system mediate K+/Na+ homeostasis in NaCl-stressed Populus euphratica cells

(2010) JIAN SUN et al.   PLANT CELL AND ENVIRONMENT

Salt-induced expression of genes related to Na+/K+ and ROS homeostasis in leaves of salt-resistant and salt-sensitive poplar species

(2010) Mingquan Ding et al.   PLANT MOLECULAR BIOLOGY

ABA perception and signalling

(2010) Agepati S. Raghavendra et al.   TRENDS IN PLANT SCIENCE

Next-generation pyrosequencing of gonad transcriptomes in the polyploid lake sturgeon (Acipenser fulvescens): the relative merits of normalization and rarefaction in gene discovery

(2009) Matthew C Hale et al.   BMC GENOMICS

De novo assembly of human genomes with massively parallel short read sequencing

(2009) R. Li et al.   GENOME RESEARCH

RNA-Seq—quantitative measurement of expression through massively parallel RNA-sequencing

(2009) Brian T. Wilhelm et al.   METHODS

Molecular characterization of putative vacuolar NHX-type Na+/H+exchanger genes from the salt-resistant treePopulus euphratica

(2009) Chu-Yu Ye et al.   PHYSIOLOGIA PLANTARUM

Single nucleotide polymorphism (SNP) discovery in the polyploidBrassica napususing Solexa transcriptome sequencing

(2009) Martin Trick et al.   PLANT BIOTECHNOLOGY JOURNAL

The High Light Response in Arabidopsis Involves ABA Signaling between Vascular and Bundle Sheath Cells

(2009) G. Galvez-Valdivieso et al.   PLANT CELL

Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection

(2009) M. Libault et al.   PLANT PHYSIOLOGY

Leaf and whole tree adaptations to mild salinity in field grown Populus euphratica

(2009) F. Zeng et al.   TREE PHYSIOLOGY

Mechanisms of Salinity Tolerance

(2008) Rana Munns et al.   Annual Review of Plant Biology

Expression profiling and functional characterization of a DREB2-type gene from Populus euphratica

(2008) Jinhuan Chen et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Applications of next-generation sequencing technologies in functional genomics

(2008) Olena Morozova et al.   GENOMICS

Dynamic repertoire of a eukaryotic transcriptome surveyed at single-nucleotide resolution

(2008) Brian T. Wilhelm et al.   NATURE

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS

RNA-Seq: a revolutionary tool for transcriptomics

(2008) Zhong Wang et al.   NATURE REVIEWS GENETICS

Deep sequencing-based expression analysis shows major advances in robustness, resolution and inter-lab portability over five microarray platforms

(2008) Peter A. C. 't Hoen et al.   NUCLEIC ACIDS RESEARCH

NaCl-Induced Alternations of Cellular and Tissue Ion Fluxes in Roots of Salt-Resistant and Salt-Sensitive Poplar Species

(2008) J. Sun et al.   PLANT PHYSIOLOGY

A Global View of Gene Activity and Alternative Splicing by Deep Sequencing of the Human Transcriptome

(2008) M. Sultan et al.   SCIENCE