New Perspectives on DNA and RNA Triplexes As Effectors of Biological Activity

Conversations between kingdoms: small RNAs

(2015) Arne Weiberg et al.   CURRENT OPINION IN BIOTECHNOLOGY

Long non-coding RNA: A new paradigm for lung cancer

(2015) Akanksha Khandelwal et al.   MOLECULAR CARCINOGENESIS

From guide to target: molecular insights into eukaryotic RNA-interference machinery

(2015) Jonathan J Ipsaro et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

From guide to target: molecular insights into eukaryotic RNA-interference machinery

(2015) Jonathan J Ipsaro et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Transcriptional regulation mechanism mediated by miRNA–DNA•DNA triplex structure stabilized by Argonaute

(2014) Julia D. Toscano-Garibay et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Structural studies of the spliceosome: zooming into the heart of the machine

(2014) Wojciech P Galej et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Impact of alternative DNA structures on DNA damage, DNA repair, and genetic instability

(2014) Guliang Wang et al.   DNA REPAIR

Ribosomal frameshifting in the CCR5 mRNA is regulated by miRNAs and the NMD pathway

(2014) Ashton Trey Belew et al.   NATURE

Evidence for a group II intron–like catalytic triplex in the spliceosome

(2014) Sebastian M Fica et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Structural basis for protein-RNA recognition in telomerase

(2014) Jing Huang et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Cooperative gene regulation by microRNA pairs and their identification using a computational workflow

(2014) Ulf Schmitz et al.   NUCLEIC ACIDS RESEARCH

The DExD/H-box ATPase Prp2p destabilizes and proofreads the catalytic RNA core of the spliceosome

(2014) A. M. Wlodaver et al.   RNA

Upregulation of the long noncoding RNA HOTAIR predicts recurrence in stage Ta/T1 bladder cancer

(2014) Ting-Hua Yan et al.   TUMOR BIOLOGY

RNA triplexes: from structural principles to biological and biotech applications

(2014) Gitali Devi et al.   Wiley Interdisciplinary Reviews-RNA

Causes of Genome Instability

(2013) Andrés Aguilera et al.   Annual Review of Genetics

RNA structure analysis of human spliceosomes reveals a compact 3D arrangement of snRNAs at the catalytic core

(2013) Maria Anokhina et al.   EMBO JOURNAL

Structure-function relationship and biogenesis regulation of the human telomerase holoenzyme

(2013) Kyle R. Hukezalie et al.   FEBS Journal

Structure and sequence elements of the CR4/5 domain of medaka telomerase RNA important for telomerase function

(2013) N.-K. Kim et al.   NUCLEIC ACIDS RESEARCH

Pyrimidine motif triple helix in the Kluyveromyces lactis telomerase RNA pseudoknot is essential for function in vivo

(2013) D. D. Cash et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The long non-coding RNAFendrrlinks epigenetic control mechanisms to gene regulatory networks in mammalian embryogenesis

(2013) Phillip Grote et al.   RNA Biology

The emerging role of triple helices in RNA biology

(2013) Nicholas K. Conrad   Wiley Interdisciplinary Reviews-RNA

A triple helix stabilizes the 3' ends of long noncoding RNAs that lack poly(A) tails

(2012) J. E. Wilusz et al.   GENES & DEVELOPMENT

Replication Fork Stalling and Checkpoint Activation by aPKD1Locus Mirror Repeat Polypurine-Polypyrimidine (Pu-Py) Tract

(2012) Guoqi Liu et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

DNA triplex structures in neurodegenerative disorder, Friedreich’s ataxia

(2012) Moganty R Rajeswari   JOURNAL OF BIOSCIENCES

An integrated encyclopedia of DNA elements in the human genome

(2012)   NATURE

DNA secondary structures: stability and function of G-quadruplex structures

(2012) Matthew L. Bochman et al.   NATURE REVIEWS GENETICS

Formation of triple-helical structures by the 3'-end sequences of MALAT1 and MEN  noncoding RNAs

(2012) J. A. Brown et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Mechanisms and implications of programmed translational frameshifting

(2012) Jonathan D. Dinman   Wiley Interdisciplinary Reviews-RNA

The Molecular Interactions That Stabilize RNA Tertiary Structure: RNA Motifs, Patterns, and Networks

(2011) Samuel E. Butcher et al.   ACCOUNTS OF CHEMICAL RESEARCH

Stem-loop structures can effectively substitute for an RNA pseudoknot in -1 ribosomal frameshifting

(2011) C.-H. Yu et al.   NUCLEIC ACIDS RESEARCH

Interaction of noncoding RNA with the rDNA promoter mediates recruitment of DNMT3b and silencing of rRNA genes

(2010) K.-M. Schmitz et al.   GENES & DEVELOPMENT

Long non-coding RNA HOTAIR reprograms chromatin state to promote cancer metastasis

(2010) Rajnish A. Gupta et al.   NATURE

Functional analysis of the SRV-1 RNA frameshifting pseudoknot

(2010) R. C. L. Olsthoorn et al.   NUCLEIC ACIDS RESEARCH

Poly(A) Tail Recognition by a Viral RNA Element Through Assembly of a Triple Helix

(2010) R. M. Mitton-Fry et al.   SCIENCE

Riboswitches: Structures and Mechanisms

(2010) A. D. Garst et al.   Cold Spring Harbor Perspectives in Biology

Triplex-forming MicroRNAs Form Stable Complexes With HIV-1 Provirus and Inhibit its Replication

(2010) Mazhar Kanak et al.   APPLIED IMMUNOHISTOCHEMISTRY & MOLECULAR MORPHOLOGY

The Spliceosome: Design Principles of a Dynamic RNP Machine

(2009) Markus C. Wahl et al.   CELL

Models for chromosomal replication-independent non-B DNA structure-induced genetic instability

(2009) Guliang Wang et al.   MOLECULAR CARCINOGENESIS

Role of TLS DNA polymerases eta and kappa in processing naturally occurring structured DNA in human cells

(2009) Rémy Bétous et al.   MOLECULAR CARCINOGENESIS

Triplex structures in an RNA pseudoknot enhance mechanical stability and increase efficiency of -1 ribosomal frameshifting

(2009) G. Chen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A structural analysis of the group II intron active site and implications for the spliceosome

(2009) K. S. Keating et al.   RNA

DNA Structure-induced Genomic Instability In Vivo

(2008) Guliang Wang et al.   JNCI-Journal of the National Cancer Institute

Crystal Structure of a Self-Spliced Group II Intron

(2008) N. Toor et al.   SCIENCE