dbl-1/TGF-β and daf-12/NHR Signaling Mediate Cell-Nonautonomous Effects of daf-16/FOXO on Starvation-Induced Developmental Arrest

HTSeq--a Python framework to work with high-throughput sequencing data

(2014) S. Anders et al.   BIOINFORMATICS

A Caenorhabditis elegans developmental decision requires insulin signaling-mediated neuron-intestine communication

(2014) W. L. Hung et al.   DEVELOPMENT

Ins-4 and daf-28 function redundantly to regulate C. elegans L1 arrest

(2014) Yutao Chen et al.   DEVELOPMENTAL BIOLOGY

Cell-Nonautonomous Effects of dFOXO/DAF-16 in Aging

(2014) Nazif Alic et al.   Cell Reports

Identification of Late Larval Stage Developmental Checkpoints in Caenorhabditis elegans Regulated by Insulin/IGF and Steroid Hormone Signaling Pathways

(2014) Adam J. Schindler et al.   PLoS Genetics

PQM-1 Complements DAF-16 as a Key Transcriptional Regulator of DAF-2-Mediated Development and Longevity

(2013) Ronald G. Tepper et al.   CELL

Direct and Indirect Gene Regulation by a Life-Extending FOXO Protein in C. elegans: Roles for GATA Factors and Lipid Gene Regulators

(2013) Peichuan Zhang et al.   Cell Metabolism

To Grow or Not to Grow: Nutritional Control of Development During Caenorhabditis elegans L1 Arrest

(2013) L. R. Baugh   GENETICS

The microRNA miR-235 couples blast-cell quiescence to the nutritional state

(2013) Hidefumi Kasuga et al.   NATURE

DAF-16 employs the chromatin remodeller SWI/SNF to promote stress resistance and longevity

(2013) Christian G. Riedel et al.   NATURE CELL BIOLOGY

Two Insulin-like Peptides Antagonistically Regulate Aversive Olfactory Learning in C. elegans

(2013) Zhunan Chen et al.   NEURON

Density dependence in Caenorhabditis larval starvation

(2013) Alexander B. Artyukhin et al.   Scientific Reports

Activin Signaling Targeted by Insulin/dFOXO Regulates Aging and Muscle Proteostasis in Drosophila

(2013) Hua Bai et al.   PLoS Genetics

Nutritional control of mRNA isoform expression during developmental arrest and recovery in C. elegans

(2012) C. S. Maxwell et al.   GENOME RESEARCH

DBL-1, a TGF- , is essential for Caenorhabditis elegans aversive olfactory learning

(2012) X. Zhang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Rieske oxygenase DAF-36 functions as a cholesterol 7-desaturase in steroidogenic pathways governing longevity

(2011) Joshua Wollam et al.   AGING CELL

Genome-wide dFOXO targets and topology of the transcriptomic response to stress and insulin signalling

(2011) N. Alic et al.   Molecular Systems Biology

Dafadine inhibits DAF-9 to promote dauer formation and longevity of Caenorhabditis elegans

(2011) Genna M Luciani et al.   Nature Chemical Biology

Sensitive and Precise Quantification of Insulin-Like mRNA Expression in Caenorhabditis elegans

(2011) L. Ryan Baugh et al.   PLoS One

REVIGO Summarizes and Visualizes Long Lists of Gene Ontology Terms

(2011) Fran Supek et al.   PLoS One

DAF-12 Regulates a Connected Network of Genes to Ensure Robust Developmental Decisions

(2011) Daniel Hochbaum et al.   PLoS Genetics

Motif Enrichment Analysis: a unified framework and an evaluation on ChIP data

(2010) Robert C McLeay et al.   BMC BIOINFORMATICS

TGF-β and Insulin Signaling Regulate Reproductive Aging via Oocyte and Germline Quality Maintenance

(2010) Shijing Luo et al.   CELL

Diverse transcription factor binding features revealed by genome-wide ChIP-seq in C. elegans

(2010) W. Niu et al.   GENOME RESEARCH

DamID in C. elegans reveals longevity-associated targets of DAF-16/FoxO

(2010) Eugene Schuster et al.   Molecular Systems Biology

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

(2010) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

GOrilla: a tool for discovery and visualization of enriched GO terms in ranked gene lists

(2009) Eran Eden et al.   BMC BIOINFORMATICS

RNA Pol II Accumulates at Promoters of Growth Genes During Developmental Arrest

(2009) L. Ryan Baugh et al.   SCIENCE

TGF-ß Sma/Mab Signaling Mutations Uncouple Reproductive Aging from Somatic Aging

(2009) Shijing Luo et al.   PLoS Genetics

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

C. elegans dauer formation and the molecular basis of plasticity

(2008) N. Fielenbach et al.   GENES & DEVELOPMENT

A TRPV Channel Modulates C. elegans Neurosecretion, Larval Starvation Survival, and Adult Lifespan

(2008) Brian H. Lee et al.   PLoS Genetics