Temporal Gillespie Algorithm: Fast Simulation of Contagion Processes on Time-Varying Networks

Epidemic processes in complex networks

(2015) Romualdo Pastor-Satorras et al.   REVIEWS OF MODERN PHYSICS

Simulating non-Markovian stochastic processes

(2014) Marian Boguñá et al.   PHYSICAL REVIEW E

Contact Patterns among High School Students

(2014) Julie Fournet et al.   PLoS One

Time varying networks and the weakness of strong ties

(2014) Márton Karsai et al.   Scientific Reports

Birth and death of links control disease spreading in empirical contact networks

(2014) Petter Holme et al.   Scientific Reports

Uncoupled Analysis of Stochastic Reaction Networks in Fluctuating Environments

(2014) Christoph Zechner et al.   PLoS Computational Biology

Behavior of susceptible-vaccinated–infected–recovered epidemics with diversity in the infection rate of individuals

(2013) Chao-Ran Cai et al.   PHYSICAL REVIEW E

The Interplay of Intrinsic and Extrinsic Bounded Noises in Biomolecular Networks

(2013) Giulio Caravagna et al.   PLoS One

Estimating Potential Infection Transmission Routes in Hospital Wards Using Wearable Proximity Sensors

(2013) Philippe Vanhems et al.   PLoS One

Activity clocks: spreading dynamics on temporal networks of human contact

(2013) Laetitia Gauvin et al.   Scientific Reports

EpiFire: An open source C++ library and application for contact network epidemiology

(2012) Thomas Hladish et al.   BMC BIOINFORMATICS

Real-time numerical forecast of global epidemic spreading: case study of 2009 A/H1N1pdm

(2012) Michele Tizzoni et al.   BMC Medicine

The Stochastic Evolution of a Protocell: The Gillespie Algorithm in a Dynamically Varying Volume

(2012) T. Carletti et al.   Computational and Mathematical Methods in Medicine

Epidemic thresholds of the susceptible-infected-susceptible model on networks: A comparison of numerical and theoretical results

(2012) Silvio C. Ferreira et al.   PHYSICAL REVIEW E

Activity driven modeling of time varying networks

(2012) N. Perra et al.   Scientific Reports

On the dynamics of human proximity for data diffusion in ad-hoc networks

(2011) André Panisson et al.   Ad Hoc Networks

Simulation of an SEIR infectious disease model on the dynamic contact network of conference attendees

(2011) Juliette Stehlé et al.   BMC Medicine

Dynamical strength of social ties in information spreading

(2011) Giovanna Miritello et al.   PHYSICAL REVIEW E

Small but slow world: How network topology and burstiness slow down spreading

(2011) M. Karsai et al.   PHYSICAL REVIEW E

Dynamics of Person-to-Person Interactions from Distributed RFID Sensor Networks

(2010) Ciro Cattuto et al.   PLoS One

Multiscale mobility networks and the spatial spreading of infectious diseases

(2009) D. Balcan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Scaling laws of human interaction activity

(2009) D. Rybski et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Integrating stochasticity and network structure into an epidemic model

(2008) C. E. Dangerfield et al.   Journal of the Royal Society Interface