The exosome controls alternative splicing by mediating the gene expression and assembly of the spliceosome complex

The spliceosome: disorder and dynamics defined

(2014) Weijun Chen et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Gene-dosage dependent overexpression at the 13q amplicon identifiesDIS3as candidate oncogene in colorectal cancer progression

(2014) Florence L.M. de Groen et al.   GENES CHROMOSOMES & CANCER

Structure of an Rrp6–RNA exosome complex bound to poly(A) RNA

(2014) Elizabeth V. Wasmuth et al.   NATURE

The RNA exosome affects iron response and sensitivity to oxidative stress

(2014) B. Tsanova et al.   RNA

The RNA helicase FRH is an ATP-dependent regulator of CK1a in the circadian clock of Neurospora crassa

(2014) Linda Lauinger et al.   Nature Communications

RNA decay machines: The exosome

(2013) Aleksander Chlebowski et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

SplicePlot: a utility for visualizing splicing quantitative trait loci

(2013) E. Wu et al.   BIOINFORMATICS

RNA-Seq analysis reveals new gene models and alternative splicing in the fungal pathogen Fusarium graminearum

(2013) Chunzhao Zhao et al.   BMC GENOMICS

Conserved RNA Helicase FRH Acts Nonenzymatically to Support the Intrinsically Disordered Neurospora Clock Protein FRQ

(2013) Jennifer M. Hurley et al.   MOLECULAR CELL

Cotranscriptional recruitment of yeast TRAMP complex to intronic sequences promotes optimal pre-mRNA splicing

(2013) Ka-Yiu Edwin Kong et al.   NUCLEIC ACIDS RESEARCH

Threading the barrel of the RNA exosome

(2013) Claudia Schneider et al.   TRENDS IN BIOCHEMICAL SCIENCES

Comparison of the yeast and human nuclear exosome complexes

(2012) Katherine E. Sloan et al.   BIOCHEMICAL SOCIETY TRANSACTIONS

The ribonuclease Dis3 is an essential regulator of the developmental transcriptome

(2012) Dezhi Hou et al.   BMC GENOMICS

Extensive Degradation of RNA Precursors by the Exosome in Wild-Type Cells

(2012) Rajani Kanth Gudipati et al.   MOLECULAR CELL

Mutation ofArabidopsis SPLICEOSOMAL TIMEKEEPER LOCUS1Causes Circadian Clock Defects

(2012) Matthew A. Jones et al.   PLANT CELL

Alternative Splicing Mediates Responses of the Arabidopsis Circadian Clock to Temperature Changes

(2012) A. B. James et al.   PLANT CELL

SKIP Is a Component of the Spliceosome Linking Alternative Splicing and the Circadian Clock in Arabidopsis

(2012) X. Wang et al.   PLANT CELL

Tri-snRNP-associated proteins interact with subunits of the TRAMP and nuclear exosome complexes, linking RNA decay and pre-mRNA splicing

(2012) Anita Nag et al.   RNA Biology

The spliceosome: a flexible, reversible macromolecular machine

(2012) Aaron A. Hoskins et al.   TRENDS IN BIOCHEMICAL SCIENCES

Detection, annotation and visualization of alternative splicing from RNA-Seq data with SplicingViewer

(2011) Qi Liu et al.   GENOMICS

Post-transcriptional control of circadian rhythms

(2011) S. Kojima et al.   JOURNAL OF CELL SCIENCE

RNA-based regulation in the plant circadian clock

(2011) Dorothee Staiger et al.   TRENDS IN PLANT SCIENCE

A methyl transferase links the circadian clock to the regulation of alternative splicing

(2010) Sabrina E. Sanchez et al.   NATURE

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

(2010) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

Analysis and design of RNA sequencing experiments for identifying isoform regulation

(2010) Yarden Katz et al.   NATURE METHODS

Spliceosome Structure and Function

(2010) C. L. Will et al.   Cold Spring Harbor Perspectives in Biology

The Exosome Regulates Circadian Gene Expression in a Posttranscriptional Negative Feedback Loop

(2009) Jinhu Guo et al.   CELL

FRQ-Interacting RNA Helicase Mediates Negative and Positive Feedback in the Neurospora Circadian Clock

(2009) M. Shi et al.   GENETICS

The CCR4-NOT Complex Physically and Functionally Interacts with TRAMP and the Nuclear Exosome

(2009) Nowel Azzouz et al.   PLoS One

DExD/H-box Prp5 protein is in the spliceosome during most of the splicing cycle

(2009) T. R. Kosowski et al.   RNA