Evolution of oligomeric state through allosteric pathways that mimic ligand binding

Dynamics and constraints of enzyme evolution

(2014) Miriam Kaltenbach et al.   JOURNAL OF EXPERIMENTAL ZOOLOGY PART B-MOLECULAR AND DEVELOPMENTAL EVOLUTION

Evolution of protein structures and interactions from the perspective of residue contact networks

(2013) Xiuwei Zhang et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Evaluation of Protein Elastic Network Models Based on an Analysis of Collective Motions

(2013) Edvin Fuglebakk et al.   Journal of Chemical Theory and Computation

What Makes a Protein Fold Amenable to Functional Innovation? Fold Polarity and Stability Trade-offs

(2013) Eynat Dellus-Gur et al.   JOURNAL OF MOLECULAR BIOLOGY

Molecular signatures of G-protein-coupled receptors

(2013) A. J. Venkatakrishnan et al.   NATURE

Stability-mediated epistasis constrains the evolution of an influenza protein

(2013) Lizhi Ian Gong et al.   eLife

Measuring and comparing structural fluctuation patterns in large protein datasets

(2012) Edvin Fuglebakk et al.   BIOINFORMATICS

Protein Conformational Diversity Modulates Sequence Divergence

(2012) Ezequiel Juritz et al.   MOLECULAR BIOLOGY AND EVOLUTION

Evolution of oligomeric state through geometric coupling of protein interfaces

(2012) T. Perica et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

REFMAC5 for the refinement of macromolecular crystal structures

(2011) Garib N. Murshudov et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Overview of theCCP4 suite and current developments

(2011) Martyn D. Winn et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Efficient, Global-Scale Quantification of Absolute Protein Amounts by Integration of Targeted Mass Spectrometry and Two-Dimensional Gel-Based Proteomics

(2011) Sandra Maass et al.   ANALYTICAL CHEMISTRY

On the Origin and Evolution of Thermophily: Reconstruction of Functional Precambrian Enzymes from Ancestors of Bacillus

(2011) J. K. Hobbs et al.   MOLECULAR BIOLOGY AND EVOLUTION

XDS

(2010) Wolfgang Kabsch   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Analyzing protein structure and function using ancestral gene reconstruction

(2010) Michael J Harms et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

A Simple Definition of Structural Regions in Proteins and Its Use in Analyzing Interface Evolution

(2010) Emmanuel D. Levy   JOURNAL OF MOLECULAR BIOLOGY

Atomic Interaction Networks in the Core of Protein Domains and Their Native Folds

(2010) Venkataramanan Soundararajan et al.   PLoS One

Deciphering the Deformation Modes Associated with Function Retention and Specialization in Members of the Ras Superfamily

(2010) Francesco Raimondi et al.   STRUCTURE

MolProbity: all-atom structure validation for macromolecular crystallography

(2009) Vincent B. Chen et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Stability effects of mutations and protein evolvability

(2009) Nobuhiko Tokuriki et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

xia2: an expert system for macromolecular crystallography data reduction

(2009) G. Winter   JOURNAL OF APPLIED CRYSTALLOGRAPHY

An epistatic ratchet constrains the direction of glucocorticoid receptor evolution

(2009) Jamie T. Bridgham et al.   NATURE

Evolutionary divergence of protein structure: The linearly forced elastic network model

(2008) Julián Echave   CHEMICAL PHYSICS LETTERS

pyr RNA binding to the Bacillus caldolyticus PyrR attenuation protein - characterization and regulation by uridine and guanosine nucleotides

(2008) Casper M. Jørgensen et al.   FEBS Journal

Regulation of Pyrimidine Biosynthetic Gene Expression in Bacteria: Repression without Repressors

(2008) C. L. Turnbough et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS