Integrative Annotation of Variants from 1092 Humans: Application to Cancer Genomics
Published 2013 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Integrative Annotation of Variants from 1092 Humans: Application to Cancer Genomics
Authors
Keywords
-
Journal
SCIENCE
Volume 342, Issue 6154, Pages 1235587
Publisher
American Association for the Advancement of Science (AAAS)
Online
2013-10-04
DOI
10.1126/science.1235587
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Punctuated Evolution of Prostate Cancer Genomes
- (2013) Sylvan C. Baca et al. CELL
- Identifying Recent Adaptations in Large-Scale Genomic Data
- (2013) Sharon R. Grossman et al. CELL
- TERT promoter mutations occur frequently in gliomas and a subset of tumors derived from cells with low rates of self-renewal
- (2013) P. J. Killela et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- TERT Promoter Mutations in Familial and Sporadic Melanoma
- (2013) S. Horn et al. SCIENCE
- Highly Recurrent TERT Promoter Mutations in Human Melanoma
- (2013) F. W. Huang et al. SCIENCE
- Interpretation of Genomic Variants Using a Unified Biological Network Approach
- (2013) Ekta Khurana et al. PLoS Computational Biology
- VAT: a computational framework to functionally annotate variants in personal genomes within a cloud-computing environment
- (2012) Lukas Habegger et al. BIOINFORMATICS
- HINT: High-quality protein interactomes and their applications in understanding human disease
- (2012) Jishnu Das et al. BMC Systems Biology
- Genome Sequencing of Pediatric Medulloblastoma Links Catastrophic DNA Rearrangements with TP53 Mutations
- (2012) Tobias Rausch et al. CELL
- Personal Omics Profiling Reveals Dynamic Molecular and Medical Phenotypes
- (2012) Rui Chen et al. CELL
- Mutational Processes Molding the Genomes of 21 Breast Cancers
- (2012) Serena Nik-Zainal et al. CELL
- Personal and population genomics of human regulatory variation
- (2012) B. Vernot et al. GENOME RESEARCH
- GENCODE: The reference human genome annotation for The ENCODE Project
- (2012) J. Harrow et al. GENOME RESEARCH
- The mutational landscape of lethal castration-resistant prostate cancer
- (2012) Catherine S. Grasso et al. NATURE
- The accessible chromatin landscape of the human genome
- (2012) Robert E. Thurman et al. NATURE
- Architecture of the human regulatory network derived from ENCODE data
- (2012) Mark B. Gerstein et al. NATURE
- Interpreting noncoding genetic variation in complex traits and human disease
- (2012) Lucas D Ward et al. NATURE BIOTECHNOLOGY
- Three-dimensional reconstruction of protein networks provides insight into human genetic disease
- (2012) Xiujuan Wang et al. NATURE BIOTECHNOLOGY
- Exome sequencing identifies recurrent SPOP, FOXA1 and MED12 mutations in prostate cancer
- (2012) Christopher E Barbieri et al. NATURE GENETICS
- Exome sequencing identifies recurrent somatic RAC1 mutations in melanoma
- (2012) Michael Krauthammer et al. NATURE GENETICS
- Evidence of Abundant Purifying Selection in Humans for Recently Acquired Regulatory Functions
- (2012) L. D. Ward et al. SCIENCE
- Systematic Localization of Common Disease-Associated Variation in Regulatory DNA
- (2012) M. T. Maurano et al. SCIENCE
- A Systematic Survey of Loss-of-Function Variants in Human Protein-Coding Genes
- (2012) D. G. MacArthur et al. SCIENCE
- Classification of human genomic regions based on experimentally determined binding sites of more than 100 transcription-related factors
- (2012) Kevin Y Yip et al. GENOME BIOLOGY
- Subsampling methods for genomic inference
- (2011) Peter J. Bickel et al. Annals of Applied Statistics
- CHASM and SNVBox: toolkit for detecting biologically important single nucleotide mutations in cancer
- (2011) Wing Chung Wong et al. BIOINFORMATICS
- AlleleSeq: analysis of allele-specific expression and binding in a network framework
- (2011) J. Rozowsky et al. Molecular Systems Biology
- Mapping copy number variation by population-scale genome sequencing
- (2011) Ryan E. Mills et al. NATURE
- The genomic complexity of primary human prostate cancer
- (2011) Michael F. Berger et al. NATURE
- Integrated genomic analyses of ovarian carcinoma
- (2011) D. Bell et al. NATURE
- A framework for variation discovery and genotyping using next-generation DNA sequencing data
- (2011) Mark A DePristo et al. NATURE GENETICS
- Analysis of genomic variation in non-coding elements using population-scale sequencing data from the 1000 Genomes Project
- (2011) Xinmeng Jasmine Mu et al. NUCLEIC ACIDS RESEARCH
- Demographic history and rare allele sharing among human populations
- (2011) S. Gravel et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Classic Selective Sweeps Were Rare in Recent Human Evolution
- (2011) R. D. Hernandez et al. SCIENCE
- Molecular Characterization of Neuroendocrine Prostate Cancer and Identification of New Drug Targets
- (2011) H. Beltran et al. Cancer Discovery
- Rare and Common Regulatory Variation in Population-Scale Sequenced Human Genomes
- (2011) Stephen B. Montgomery et al. PLoS Genetics
- RSEQtools: a modular framework to analyze RNA-Seq data using compact, anonymized data summaries
- (2010) Lukas Habegger et al. BIOINFORMATICS
- Targeted deletion of the 9p21 non-coding coronary artery disease risk interval in mice
- (2010) Axel Visel et al. NATURE
- A map of human genome variation from population-scale sequencing
- (2010) Richard M. Durbin et al. NATURE
- International network of cancer genome projects
- (2010) Thomas J. Hudson (Chairperson) et al. NATURE
- Integrative Analysis of the Caenorhabditis elegans Genome by the modENCODE Project
- (2010) M. B. Gerstein et al. SCIENCE
- Identifying a High Fraction of the Human Genome to be under Selective Constraint Using GERP++
- (2010) Eugene V. Davydov et al. PLoS Computational Biology
- Identification and analysis of unitary pseudogenes: historic and contemporary gene losses in humans and other primates
- (2010) Zhengdong D Zhang et al. GENOME BIOLOGY
- Population Differentiation as an Indicator of Recent Positive Selection in Humans: An Empirical Evaluation
- (2009) Y. Xue et al. GENETICS
- Analytical methods for inferring functional effects of single base pair substitutions in human cancers
- (2009) William Lee et al. HUMAN GENETICS
- Edgetic perturbation models of human inherited disorders
- (2009) Quan Zhong et al. Molecular Systems Biology
- Nucleotide-resolution analysis of structural variants using BreakSeq and a breakpoint library
- (2009) Hugo Y K Lam et al. NATURE BIOTECHNOLOGY
- A census of human transcription factors: function, expression and evolution
- (2009) Juan M. Vaquerizas et al. NATURE REVIEWS GENETICS
- Potential etiologic and functional implications of genome-wide association loci for human diseases and traits
- (2009) L. A. Hindorff et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Human Genome Sequencing Using Unchained Base Reads on Self-Assembling DNA Nanoarrays
- (2009) R. Drmanac et al. SCIENCE
- The Human Gene Mutation Database: 2008 update
- (2009) Peter D Stenson et al. Genome Medicine
- The promise and reality of personal genomics
- (2009) Bryndis Yngvadottir et al. GENOME BIOLOGY
- Evo-Devo and an Expanding Evolutionary Synthesis: A Genetic Theory of Morphological Evolution
- (2008) Sean B. Carroll CELL
- Natural Selection on Genes that Underlie Human Disease Susceptibility
- (2008) Ran Blekhman et al. CURRENT BIOLOGY
- Fast and flexible simulation of DNA sequence data
- (2008) G. K. Chen et al. GENOME RESEARCH
- Natural selection has driven population differentiation in modern humans
- (2008) Luis B Barreiro et al. NATURE GENETICS
- DEG 5.0, a database of essential genes in both prokaryotes and eukaryotes
- (2008) R. Zhang et al. NUCLEIC ACIDS RESEARCH
- Null mutations in human and mouse orthologs frequently result in different phenotypes
- (2008) B.-Y. Liao et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- High-Quality Binary Protein Interaction Map of the Yeast Interactome Network
- (2008) H. Yu et al. SCIENCE
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now