Lsm proteins and Hfq

Regulation of small RNA stability: methylation and beyond

(2012) Lijuan Ji et al.   CELL RESEARCH

C16orf57, a gene mutated in poikiloderma with neutropenia, encodes a putative phosphodiesterase responsible for the U6 snRNA 3' end modification

(2012) S. Mroczek et al.   GENES & DEVELOPMENT

mRNA 3' Tagging Is Induced by Nonsense-Mediated Decay and Promotes Ribosome Dissociation

(2012) I. Y. Morozov et al.   MOLECULAR AND CELLULAR BIOLOGY

A Complex Containing the CPSF73 Endonuclease and Other Polyadenylation Factors Associates with U7 snRNP and Is Recruited to Histone Pre-mRNA for 3'-End Processing

(2012) X.-C. Yang et al.   MOLECULAR AND CELLULAR BIOLOGY

The Seed Region of a Small RNA Drives the Controlled Destruction of the Target mRNA by the Endoribonuclease RNase E

(2012) Katarzyna J. Bandyra et al.   MOLECULAR CELL

Telomerase RNA biogenesis involves sequential binding by Sm and Lsm complexes

(2012) Wen Tang et al.   NATURE

Eri1 degrades the stem-loop of oligouridylated histone mRNAs to induce replication-dependent decay

(2012) Kai P Hoefig et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Structural mechanism of Staphylococcus aureus Hfq binding to an RNA A-tract

(2012) Nicola Horstmann et al.   NUCLEIC ACIDS RESEARCH

Crystal Structures of Lsm3, Lsm4 and Lsm5/6/7 from Schizosaccharomyces pombe

(2012) Donghui Wu et al.   PLoS One

RelA protein stimulates the activity of RyhB small RNA by acting on RNA-binding protein Hfq

(2012) L. Argaman et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Small RNA binding to the lateral surface of Hfq hexamers and structural rearrangements upon mRNA target recognition

(2012) E. Sauer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Both Sm-domain and C-terminal extension of Lsm1 are important for the RNA-binding activity of the Lsm1-7-Pat1 complex

(2012) A. Chowdhury et al.   RNA

The functional Hfq-binding module of bacterial sRNAs consists of a double or single hairpin preceded by a U-rich sequence and followed by a 3' poly(U) tail

(2012) H. Ishikawa et al.   RNA

mRNAs containing the histone 3' stem-loop are degraded primarily by decapping mediated by oligouridylation of the 3' end

(2012) W. Su et al.   RNA

Mpn1, Mutated in Poikiloderma with Neutropenia Protein 1, Is a Conserved 3′-to-5′ RNA Exonuclease Processing U6 Small Nuclear RNA

(2012) Vadim Shchepachev et al.   Cell Reports

The significant other: splicing by the minor spliceosome

(2012) Janne J. Turunen et al.   Wiley Interdisciplinary Reviews-RNA

Transcription attenuation in bacteria: theme and variations

(2011) M. Naville et al.   Briefings in Functional Genomics

Lsm1 promotes genomic stability by controlling histone mRNA decay

(2011) Ana B Herrero et al.   EMBO JOURNAL

RNase E action at a distance: degradation of target mRNAs mediated by an Hfq-binding small RNA in bacteria

(2011) T. Morita et al.   GENES & DEVELOPMENT

Structure of the LSm657 Complex: An Assembly Intermediate of the LSm1–7 and LSm2–8 Rings

(2011) Markus Mund et al.   JOURNAL OF MOLECULAR BIOLOGY

Regulation by Small RNAs in Bacteria: Expanding Frontiers

(2011) Gisela Storz et al.   MOLECULAR CELL

Hfq and its constellation of RNA

(2011) Jörg Vogel et al.   NATURE REVIEWS MICROBIOLOGY

Crystal structure of Hfq from Bacillus subtilis in complex with SELEX-derived RNA aptamer: insight into RNA-binding properties of bacterial Hfq

(2011) Tatsuhiko Someya et al.   NUCLEIC ACIDS RESEARCH

PolyU tail of rho-independent terminator of bacterial small RNAs is essential for Hfq action

(2011) Hironori Otaka et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Structural basis for RNA 3′-end recognition by Hfq

(2011) Evelyn Sauer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Diverse roles of host RNA binding proteins in RNA virus replication

(2011) Zhenghe Li et al.   RNA Biology

Biogenesis of spliceosomal small nuclear ribonucleoproteins

(2011) Utz Fischer et al.   Wiley Interdisciplinary Reviews-RNA

Importance and key events of prokaryotic RNA decay: the ultimate fate of an RNA molecule

(2011) Inês Jesus Silva et al.   Wiley Interdisciplinary Reviews-RNA

The structures of mutant forms of Hfq fromPseudomonas aeruginosareveal the importance of the conserved His57 for the protein hexamer organization

(2010) Olga Moskaleva et al.   Acta Crystallographica Section F-Structural Biology and Crystallization Communications

Pat1 proteins: a life in translation, translation repression and mRNA decay

(2010) Aline Marnef et al.   BIOCHEMICAL SOCIETY TRANSACTIONS

A comprehensive survey of 3' animal miRNA modification events and a possible role for 3' adenylation in modulating miRNA targeting effectiveness

(2010) A. M. Burroughs et al.   GENOME RESEARCH

Decapping Activators in Saccharomyces cerevisiae Act by Multiple Mechanisms

(2010) Tracy Nissan et al.   MOLECULAR CELL

Hfq binding at RhlB-recognition region of RNase E is crucial for the rapid degradation of target mRNAs mediated by sRNAs in Escherichia coli

(2010) Yoshiki Ikeda et al.   MOLECULAR MICROBIOLOGY

The human cytoplasmic RNA terminal U-transferase ZCCHC11 targets histone mRNAs for degradation

(2010) M.-J. Schmidt et al.   RNA

Mechanisms of deadenylation-dependent decay

(2010) Chyi-Ying A. Chen et al.   Wiley Interdisciplinary Reviews-RNA

Jalview Version 2--a multiple sequence alignment editor and analysis workbench

(2009) A. M. Waterhouse et al.   BIOINFORMATICS

Cyanobacteria contain a structural homologue of the Hfq protein with altered RNA-binding properties

(2009) Andreas Bøggild et al.   FEBS Journal

CUCU Modification of mRNA Promotes Decapping and Transcript Degradation in Aspergillus nidulans

(2009) I. Y. Morozov et al.   MOLECULAR AND CELLULAR BIOLOGY

Decapping is preceded by 3′ uridylation in a novel pathway of bulk mRNA turnover

(2009) Olivia S Rissland et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Structure of Escherichia coli Hfq bound to polyriboadenylate RNA

(2009) T. M. Link et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Sm/Lsm Genes Provide a Glimpse into the Early Evolution of the Spliceosome

(2009) Stella Veretnik et al.   PLoS Computational Biology

Degradation of histone mRNA requires oligouridylation followed by decapping and simultaneous degradation of the mRNA both 5' to 3' and 3' to 5'

(2008) T. E. Mullen et al.   GENES & DEVELOPMENT

RAP55: Insights into an evolutionarily conserved protein family

(2008) Aline Marnef et al.   INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY

Crystal Structure of Lsm3 Octamer from Saccharomyces cerevisiae: Implications for Lsm Ring Organisation and Recruitment

(2008) Nishen Naidoo et al.   JOURNAL OF MOLECULAR BIOLOGY

lsm1 mutations impairing the ability of the Lsm1p-7p-Pat1p complex to preferentially bind to oligoadenylated RNA affect mRNA decay in vivo

(2008) A. Chowdhury et al.   RNA

Structure of yeast U6 snRNPs: Arrangement of Prp24p and the LSm complex as revealed by electron microscopy

(2008) R. Karaduman et al.   RNA

3'-cyclic phosphorylation of U6 snRNA leads to recruitment of recycling factor p110 through LSm proteins

(2008) K. Licht et al.   RNA