Reconsidering rumen microbial consortia to enhance feed efficiency and reduce environmental impact of ruminant livestock production systems

Detection and identification of rumen bacteria constituting a fibrolytic consortium dominated byFibrobacter succinogenes

(2010) Takumi SHINKAI et al.   ANIMAL SCIENCE JOURNAL

pH dynamics and bacterial community composition in the rumen of lactating dairy cows

(2010) A. Palmonari et al.   JOURNAL OF DAIRY SCIENCE

Shifts in bacterial community composition in the rumen of lactating dairy cows under milk fat-depressing conditions

(2010) P.J. Weimer et al.   JOURNAL OF DAIRY SCIENCE

The effects of forage proportion and rapidly degradable dry matter from concentrate on ruminal digestion in dairy cows fed corn silage–based diets with fixed neutral detergent fiber and starch contents

(2010) C. Lechartier et al.   JOURNAL OF DAIRY SCIENCE

Endogenous expression of TRPV5 and TRPV6 calcium channels in human leukemia K562 cells

(2009) Svetlana B. Semenova et al.   AMERICAN JOURNAL OF PHYSIOLOGY-CELL PHYSIOLOGY

ARISA analysis of ruminal bacterial community dynamics in lactating dairy cows during the feeding cycle

(2009) David G. Welkie et al.   ANAEROBE

Effects of capric acid on rumen methanogenesis and biohydrogenation of linoleic and α-linolenic acid

(2009) G. Goel et al.   Animal

Role of the protozoan Isotricha prostoma, liquid-, and solid-associated bacteria in rumen biohydrogenation of linoleic acid

(2009) C. Boeckaert et al.   Animal

Evaluating amplified rDNA restriction analysis assay for identification of bacterial communities

(2009) Menachem Y. Sklarz et al.   ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY

Dietary phytochemicals as rumen modifiers: a review of the effects on microbial populations

(2009) Amlan K. Patra et al.   ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY

A Vaccine against Rumen Methanogens Can Alter the Composition of Archaeal Populations

(2009) Y. J. Williams et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Reverse Transcription of 16S rRNA To Monitor Ribosome-Synthesizing Bacterial Populations in the Environment

(2009) T. Lu et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Assessment of the Microbial Ecology of Ruminal Methanogens in Cattle with Different Feed Efficiencies

(2009) M. Zhou et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Rumen Microbiome Composition Determined Using Two Nutritional Models of Subacute Ruminal Acidosis

(2009) E. Khafipour et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Quantitative Community Fingerprinting Methods for Estimating the Abundance of Operational Taxonomic Units in Natural Microbial Communities

(2009) A. Ramette   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Inhibition of methanogens by bromochloromethane: effects on microbial communities and rumen fermentation using batch and continuous fermentations

(2009) Gunjan Goel et al.   BRITISH JOURNAL OF NUTRITION

An Efficient RNA Extraction Method for Estimating Gut Microbial Diversity by Polymerase Chain Reaction

(2009) Seungha Kang et al.   CURRENT MICROBIOLOGY

Fibrolytic capabilities of ruminal bacteriumFibrobacter succinogenesin relation to its phylogenetic grouping

(2009) Takumi Shinkai et al.   FEMS MICROBIOLOGY LETTERS

Bovicin HC5 inhibits wasteful amino acid degradation by mixed ruminal bacteriain vitro

(2009) Janaína R. Lima et al.   FEMS MICROBIOLOGY LETTERS

Evaluation of procedures for detaching particle-associated microbes from forage and concentrate incubated in Rusitec fermenters: Efficiency of recovery and representativeness of microbial isolates1

(2009) M. E. Martínez et al.   JOURNAL OF ANIMAL SCIENCE

Technical note: Bacterial diversity and fermentation end products in rumen fluid samples collected via oral lavage or rumen cannula

(2009) S. L. Lodge-Ivey et al.   JOURNAL OF ANIMAL SCIENCE

Biochemical Analysis of a  -D-Xylosidase and a Bifunctional Xylanase-Ferulic Acid Esterase from a Xylanolytic Gene Cluster in Prevotella ruminicola 23

(2009) D. Dodd et al.   JOURNAL OF BACTERIOLOGY

Effect of lauric acid and coconut oil on ruminal fermentation, digestion, ammonia losses from manure, and milk fatty acid composition in lactating cows

(2009) A.N. Hristov et al.   JOURNAL OF DAIRY SCIENCE

Influence of detachment procedure and diet on recovery of solid-associated bacteria from sheep ruminal digesta and representativeness of bacterial isolates as assessed by automated ribosomal intergenic spacer analysis-polymerase chain reaction

(2009) S. Ramos et al.   JOURNAL OF DAIRY SCIENCE

Crushed sunflower, flax, or canola seeds in lactating dairy cow diets: Effects on methane production, rumen fermentation, and milk production

(2009) K.A. Beauchemin et al.   JOURNAL OF DAIRY SCIENCE

A meta-analysis of feed digestion in dairy cows. 1. The effects of forage and concentrate factors on total diet digestibility

(2009) J. Nousiainen et al.   JOURNAL OF DAIRY SCIENCE

Repeated ruminal acidosis challenges in lactating dairy cows at high and low risk for developing acidosis: Feeding, ruminating, and lying behavior

(2009) T.J. DeVries et al.   JOURNAL OF DAIRY SCIENCE

Feeding saponin-containing Yucca schidigera and Quillaja saponaria to decrease enteric methane production in dairy cows

(2009) L. Holtshausen et al.   JOURNAL OF DAIRY SCIENCE

Effect of pH and level of concentrate in the diet on the production of biohydrogenation intermediates in a dual-flow continuous culture

(2009) M.C. Fuentes et al.   JOURNAL OF DAIRY SCIENCE

Effect of dietary forage to concentrate ratio on volatile fatty acid absorption and the expression of genes related to volatile fatty acid absorption and metabolism in ruminal tissue

(2009) G.B. Penner et al.   JOURNAL OF DAIRY SCIENCE

An evaluation of exogenous enzymes with amylolytic activity for dairy cows

(2009) C.M. Klingerman et al.   JOURNAL OF DAIRY SCIENCE

Limitations and benefits of ARISA intra-genomic diversity fingerprinting

(2009) Radu Popa et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Functional principal component data analysis: A new method for analysing microbial community fingerprints

(2009) Janine B. Illian et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Development of a RT-qPCR method for the quantification of Fibrobacter succinogenes S85 glycoside hydrolase transcripts in the rumen content of gnotobiotic and conventional sheep

(2009) Christel Béra-Maillet et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Epithelial Capacity for Apical Uptake of Short Chain Fatty Acids Is a Key Determinant for Intraruminal pH and the Susceptibility to Subacute Ruminal Acidosis in Sheep

(2009) Gregory B. Penner et al.   JOURNAL OF NUTRITION

Diversity and Strain Specificity of Plant Cell Wall Degrading Enzymes Revealed by the Draft Genome of Ruminococcus flavefaciens FD-1

(2009) Margret E. Berg Miller et al.   PLoS One

Gene-centric metagenomics of the fiber-adherent bovine rumen microbiome reveals forage specific glycoside hydrolases

(2009) Jennifer M. Brulc et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Advances in microbial ecosystem concepts and their consequences for ruminant agriculture

(2008) J. E. Edwards et al.   Animal

Long-Term Monensin Supplementation Does Not Significantly Affect the Quantity or Diversity of Methanogens in the Rumen of the Lactating Dairy Cow

(2008) S. E. Hook et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Effect of monensin feeding and withdrawal on populations of individual bacterial species in the rumen of lactating dairy cows fed high-starch rations

(2008) Paul J. Weimer et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Methanogen genomics to discover targets for methane mitigation technologies and options for alternative H2utilisation in the rumen

(2008) Graeme Attwood et al.   Australian journal of experimental agriculture

Linking rumen function to animal response by application of metagenomics techniques

(2008) J. L. Firkins et al.   Australian journal of experimental agriculture

Effects of the absence of protozoa from birth or from weaning on the growth and methane production of lambs

(2008) R. S. Hegarty et al.   BRITISH JOURNAL OF NUTRITION

A renaissance for the pioneering 16S rRNA gene

(2008) Susannah G Tringe et al.   CURRENT OPINION IN MICROBIOLOGY

The great divide: coordinating cell cycle events during bacterial growth and division

(2008) Daniel P Haeusser et al.   CURRENT OPINION IN MICROBIOLOGY

Quantitative analysis of cellulose degradation and growth of cellulolytic bacteria in the rumen

(2008) James B. Russell et al.   FEMS MICROBIOLOGY ECOLOGY

Advantages and limitations of quantitative PCR (Q-PCR)-based approaches in microbial ecology

(2008) Cindy J. Smith et al.   FEMS MICROBIOLOGY ECOLOGY

Linkage of microbial ecology to phenotype: correlation of rumen microbial ecology to cattle's feed efficiency

(2008) Le Luo Guan et al.   FEMS MICROBIOLOGY LETTERS

Novel approaches toward preferential detection of viable cells using nucleic acid amplification techniques

(2008) Andreas Nocker et al.   FEMS MICROBIOLOGY LETTERS

High-throughput diversity and functionality analysis of the gastrointestinal tract microbiota

(2008) E G Zoetendal et al.   GUT

Methane output and diet digestibility in response to feeding dairy cows crude linseed, extruded linseed, or linseed oil1

(2008) C. Martin et al.   JOURNAL OF ANIMAL SCIENCE

A protease additive increases fermentation of alfalfa diets by mixed ruminal microorganisms in vitro1

(2008) D. Colombatto et al.   JOURNAL OF ANIMAL SCIENCE

Efficacy of Liquid Feeds Varying in Concentration and Composition of Fat, Nonprotein Nitrogen, and Nonfiber Carbohydrates for Lactating Dairy Cows

(2008) J.L. Firkins et al.   JOURNAL OF DAIRY SCIENCE

Effect on Production of Replacing Dietary Starch with Sucrose in Lactating Dairy Cows

(2008) G.A. Broderick et al.   JOURNAL OF DAIRY SCIENCE

Interaction of molasses and monensin in alfalfa hay- or corn silage-based diets on rumen fermentation, total tract digestibility, and milk production by Holstein cows

(2008) E.R. Oelker et al.   JOURNAL OF DAIRY SCIENCE

Rumen ciliated protozoa decrease generation time and adjust 18S ribosomal DNA copies to adapt to decreased transfer interval, starvation, and monensin

(2008) J.T. Sylvester et al.   JOURNAL OF DAIRY SCIENCE

Species richness in soil bacterial communities: A proposed approach to overcome sample size bias

(2008) Noha H. Youssef et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Evaluation of isolation methods and RNA integrity for bacterial RNA quantitation

(2008) Courtney E. Jahn et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Effect of tea saponin on methanogenesis, microbial community structure and expression ofmcrAgene, in cultures of rumen micro-organisms

(2008) Y.Q. Guo et al.   LETTERS IN APPLIED MICROBIOLOGY

BOARD-INVITED REVIEW: Recent advances in biohydrogenation of unsaturated fatty acids within the rumen microbial ecosystem1

(2007) T. C. Jenkins et al.   JOURNAL OF ANIMAL SCIENCE

Changes in rumen microbial fermentation are due to a combined effect of type of diet and pH1

(2007) S. Calsamiglia et al.   JOURNAL OF ANIMAL SCIENCE