Quantitative neuroanatomy of all Purkinje cells with light sheet microscopy and high-throughput image analysis

Large-scale automated identification of mouse brain cells in confocal light sheet microscopy images

(2014) Paolo Frasconi et al.   BIOINFORMATICS

Whole-Brain Imaging with Single-Cell Resolution Using Chemical Cocktails and Computational Analysis

(2014) Etsuo A. Susaki et al.   CELL

Space–time wiring specificity supports direction selectivity in the retina

(2014) Jinseop S. Kim et al.   NATURE

Advanced CLARITY for rapid and high-resolution imaging of intact tissues

(2014) Raju Tomer et al.   Nature Protocols

The log-dynamic brain: how skewed distributions affect network operations

(2014) György Buzsáki et al.   NATURE REVIEWS NEUROSCIENCE

Associations among exposure to methylmercury, reduced Reelin expression, and gender in the cerebellum of developing mice

(2014) Filippo Biamonte et al.   NEUROTOXICOLOGY

Virtual finger boosts three-dimensional imaging and microsurgery as well as terabyte volume image visualization and analysis

(2014) Hanchuan Peng et al.   Nature Communications

Post-natal development of the Reeler mouse cerebellum: An ultrastructural study

(2013) Claudia Castagna et al.   ANNALS OF ANATOMY-ANATOMISCHER ANZEIGER

TeraStitcher - A tool for fast automatic 3D-stitching of teravoxel-sized microscopy images

(2013) Alessandro Bria et al.   BMC BIOINFORMATICS

Glutamate Dysfunction Associated with Developmental Cerebellar Damage: Relevance to Autism Spectrum Disorders

(2013) Eric McKimm et al.   CEREBELLUM

Correlative two-photon and light sheet microscopy

(2013) Ludovico Silvestri et al.   METHODS

Structural and molecular interrogation of intact biological systems

(2013) Kwanghun Chung et al.   NATURE

Mapping brain circuitry with a light microscope

(2013) Pavel Osten et al.   NATURE METHODS

Continuously tracing brain-wide long-distance axonal projections in mice at a one-micron voxel resolution

(2013) Hui Gong et al.   NEUROIMAGE

Serial two-photon tomography for automated ex vivo mouse brain imaging

(2012) Timothy Ragan et al.   NATURE METHODS

Confocal light sheet microscopy: micron-scale neuroanatomy of the entire mouse brain

(2012) L. Silvestri et al.   OPTICS EXPRESS

Chemical Clearing and Dehydration of GFP Expressing Mouse Brains

(2012) Klaus Becker et al.   PLoS One

Light sheet microscopy of living or cleared specimens

(2011) Philipp J Keller et al.   CURRENT OPINION IN NEUROBIOLOGY

Wiring specificity in the direction-selectivity circuit of the retina

(2011) Kevin L. Briggman et al.   NATURE

Three-dimensional imaging of the unsectioned adult spinal cord to assess axon regeneration and glial responses after injury

(2011) Ali Ertürk et al.   NATURE MEDICINE

Scanning light-sheet microscopy in the whole mouse brain with HiLo background rejection

(2010) Jerome Mertz et al.   JOURNAL OF BIOMEDICAL OPTICS

V3D enables real-time 3D visualization and quantitative analysis of large-scale biological image data sets

(2010) Hanchuan Peng et al.   NATURE BIOTECHNOLOGY

Migration, early axonogenesis, and Reelin-dependent layer-forming behavior of early/posterior-born Purkinje cells in the developing mouse lateral cerebellum

(2010) Takaki Miyata et al.   Neural Development

Micro-Optical Sectioning Tomography to Obtain a High-Resolution Atlas of the Mouse Brain

(2010) A. Li et al.   SCIENCE

Five points on columns

(2010) Rockland   Frontiers in Neuroanatomy

From Form to Function: the Ways to Know a Neuron

(2009) Ian A. Meinertzhagen et al.   JOURNAL OF NEUROGENETICS

Interactions between neuroactive steroids and reelin haploinsufficiency in Purkinje cell survival

(2009) Filippo Biamonte et al.   NEUROBIOLOGY OF DISEASE

Serial Section Scanning Electron Microscopy of Adult Brain Tissue Using Focused Ion Beam Milling

(2008) G. Knott et al.   JOURNAL OF NEUROSCIENCE

The Reelin Receptors Apoer2 and Vldlr Coordinate the Patterning of Purkinje Cell Topography in the Developing Mouse Cerebellum

(2008) Matt Larouche et al.   PLoS One

Reconstruction of Zebrafish Early Embryonic Development by Scanned Light Sheet Microscopy

(2008) P. J. Keller et al.   SCIENCE

Magnetic resonance imaging of neural circuits

(2008) Jeff Duyn et al.   Nature clinical practice. Cardiovascular medicine