4.3 Article Proceedings Paper

Endohexosaminidase-catalyzed synthesis of glycopeptides and proteins

Journal

PURE AND APPLIED CHEMISTRY
Volume 85, Issue 9, Pages 1847-1863

Publisher

WALTER DE GRUYTER GMBH
DOI: 10.1351/PAC-CON-12-09-10

Keywords

carbohydrates; endohexosaminidases; enzyme catalysis; N-glycans; glycopeptides; glycoproteins; peptides; proteins

Funding

  1. Royal Society of New Zealand (Marsden Fund)
  2. BBSRC (UK)
  3. EPSRC (UK)

Ask authors/readers for more resources

The synthetic application of endohexosaminidase enzymes (e. g., Endo A, Endo M, Endo D) promises to allow ready access to a wide variety of defined homogeneous glyco proteins and glycopeptides. The use of N-glycan oligosaccharides that are activated at the reducing terminus as oxazolines allows their high-yielding attachment to almost any amino acid, peptide, or protein that contains a GlcNAc residue as an acceptor. A wide variety of oxazoline donors are readily available, either by total synthesis or by isolation of the corresponding oligosaccharide from natural sources and then conversion to the oxazoline in water. The synthetic potential of the enzymes is particularly augmented by the production of mutant glycosynthases, the use of which allows the synthesis of a wide variety of glycopeptides and glycoproteins bearing defined homogeneous N-glycan structures.

Authors

I am an author on this paper
Click your name to claim this paper and add it to your profile.

Reviews

Primary Rating

4.3
Not enough ratings

Secondary Ratings

Novelty
-
Significance
-
Scientific rigor
-
Rate this paper

Recommended

Editorial Material Chemistry, Multidisciplinary

Meet the Board of ChemistryOpen: Antony J. Fairbanks

Antony J. Fairbanks

CHEMISTRYOPEN (2019)

Article Biochemistry & Molecular Biology

Rapid synthesis of N-glycan oxazolines from locust bean gum via the Lafont rearrangement

Sivasinthujah Paramasivam, Antony J. Fairbanks

CARBOHYDRATE RESEARCH (2019)

Review Biochemistry & Molecular Biology

Chemoenzymatic synthesis of glycoproteins

Antony J. Fairbanks

CURRENT OPINION IN CHEMICAL BIOLOGY (2019)

Article Chemistry, Organic

Direct Synthesis of para-Nitrophenyl Glycosides from Reducing Sugars in Water

Xin Qiu, Antony J. Fairbanks

ORGANIC LETTERS (2020)

Article Chemistry, Organic

Total Synthesis of Glycosylated Human Interferon-γ

Xiaoyi Wang, Anneliese S. Ashhurst, Luke J. Dowman, Emma E. Watson, Henry Y. Li, Antony J. Fairbanks, Mark Larance, Ann Kwan, Richard J. Payne

ORGANIC LETTERS (2020)

Article Biochemistry & Molecular Biology

Applications of Shoda's reagent (DMC) and analogues for activation of the anomeric centre of unprotected carbohydrates

Antony J. Fairbanks

Summary: 2-Chloro-1,3-dimethylimidazolinium chloride (DMC) and its derivatives are valuable for selectively activating the anomeric center of unprotected reducing sugars in aqueous solution, allowing for efficient synthesis of glycosides and glycoconjugates without traditional protecting group manipulations. This mini-review explores the development and recent applications of DMC in protecting group-free synthesis.

CARBOHYDRATE RESEARCH (2021)

Article Biochemistry & Molecular Biology

Reaction dynamics and residue identification of haemoglobin modification by acrolein, a lipid-peroxidation by-product

Moritz Lasse, Anja R. Stampfli, Thomas Orban, Roshit K. Bothara, Juliet A. Gerrard, Antony J. Fairbanks, Neil R. Pattinson, Renwick C. J. Dobson

Summary: The study identified acrolein modifications on hemoglobin using mass spectrometry and found that these modifications have minimal impact on the secondary structure of hemoglobin. Acrolein modifications promote the formation of crosslinked octamers and alter the response to O2 binding. The study provides qualitative evidence for potential targeted mass spectrometric or immunometric assays for acrolein modified hemoglobin as an oxidative stress marker.

BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS (2021)

Article Biochemistry & Molecular Biology

N-acetylmannosamine-6-phosphate 2-epimerase uses a novel substrate-assisted mechanism to catalyze amino sugar epimerization

Michael J. Currie, Lavanyaa Manjunath, Christopher R. Horne, Phillip M. Rendle, Ramaswamy Subramanian, Rosmarie Friemann, Antony J. Fairbanks, Andrew C. Muscroft-Taylor, Rachel A. North, Renwick C. J. Dobson

Summary: The study found that the enzyme NanE may use a novel substrate-assisted proton displacement mechanism for catalysis, by re-evaluating the central role of Glu180 and the catalytic lysine, and identifying several active-site residues related to the mechanism. This discovery could be helpful in developing inhibitors for the enzyme or producing biocatalysts capable of changing the stereochemistry of molecules through enzyme engineering.

JOURNAL OF BIOLOGICAL CHEMISTRY (2021)

Article Biochemistry & Molecular Biology

Synthesis of N-acetylmannosamine-6-phosphate derivatives to investigate the mechanism of N-acetylmannosamine-6-phosphate 2-epimerase

Tanzeel Arif, Michael J. Currie, Renwick C. J. Dobson, Harriet L. Newson, Vivek Poonthiyil, Antony J. Fairbanks, Rachel A. North, Phillip M. Rendle

Summary: The synthesis of analogues of natural enzyme substrates can help deduce enzymatic mechanisms, as demonstrated by the investigation into N-acetylmannosamine-6-phosphate 2-epimerase. The study suggests that this enzyme may utilize a substrate-assisted proton displacement mechanism, with two novel analogues showing different binding orientations at the enzyme's active site.

CARBOHYDRATE RESEARCH (2021)

Correction Biochemistry & Molecular Biology

Reaction dynamics and residue identification of haemoglobin modification by acrolein, a lipid-peroxidation by-product (vol 1865, 130013, 2021)

Moritz Lasse, Anja R. Stampfli, Thomas Orban, Roshit K. Bothara, Juliet A. Gerrard, Antony J. Fairbanks, Neil R. Pattinson, Renwick C. J. Dobson

BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS (2022)

Article Chemistry, Organic

Selective Anomeric Acetylation of Unprotected Sugars with Acetic Anhydride in Water

Xin Qiu, Daniel Chong, Antony J. Fairbanks

Summary: Unprotected sugars can be selectively acetylated in aqueous solution by stirring with acetic anhydride and a weak base, such as sodium carbonate. This reaction specifically targets the anomeric hydroxyl group of mannose, 2-acetamido, and 2-deoxy sugars and can be conducted on a large scale. However, over-reaction and the formation of product mixtures can occur due to competitive intramolecular migration of the 1-O-acetate to the 2-hydroxyl group when these two substituents are in cis configuration.

ORGANIC LETTERS (2023)

Article Chemistry, Multidisciplinary

Protecting group free glycosylation: one-pot stereocontrolled access to 1,2-trans glycosides and (1→6)-linked disaccharides of 2-acetamido sugars

Xin Qiu, Anna L. Garden, Antony J. Fairbanks

Summary: In this study, a new method for synthesizing glycosides was discovered. Unprotected 2-acetamido sugars were directly converted into their oxazolines in aqueous solution using 2-chloro-1,3-dimethylimidazolinium chloride (DMC) and a suitable base. Freeze drying and acid-catalyzed reaction with an alcohol as solvent yielded 1,2-trans-glycosides in good yield. Alternatively, using an aprotic solvent system and acidic activation with an excess of unprotected glycoside as a glycosyl acceptor led to the stereoselective formation of 1,2-trans-linked disaccharides without any protecting group manipulations. Reactions using aryl glycosides as acceptors were completely regioselective, producing only (1->6)-linked disaccharides.

CHEMICAL SCIENCE (2022)

Meeting Abstract Biochemistry & Molecular Biology

Synthesis of Glycopeptide and Glycoprotein Remodelling for Immunological Studies

Sivasinthujah Srikokulan, Antony Fairbanks

FASEB JOURNAL (2021)

Article Chemistry, Organic

Scope of the DMC mediated glycosylation of unprotected sugars with phenols in aqueous solution

Xin Qiu, Antony J. Fairbanks

ORGANIC & BIOMOLECULAR CHEMISTRY (2020)

Article Chemistry, Multidisciplinary

Efficient synthesis and enzymatic extension of an N-GlcNAz asparagine building block

Mikkel Haarslev Schroder Marqvorsen, Sivasinthujah Paramasivam, Ward Doelman, Antony John Fairbanks, Sander Lzaak van Kasteren

CHEMICAL COMMUNICATIONS (2019)

No Data Available