Identification of cardiac myofilament protein isoforms using multiple mass spectrometry based approaches

Organization of F-Actin by Fesselin (avian smooth muscle synaptopodin 2)

(2013) Mechthild M. Schroeter et al.   BIOCHEMISTRY

Characterization of the cardiac myosin binding protein-C phosphoproteome in healthy and failing human hearts

(2013) Viola Kooij et al.   JOURNAL OF MOLECULAR AND CELLULAR CARDIOLOGY

Protein isoform-specific validation defines multiple chloride intracellular channel and tropomyosin isoforms as serological biomarkers of ovarian cancer

(2013) Hsin-Yao Tang et al.   Journal of Proteomics

Myopodin is an F-actin bundling protein with multiple independent actin-binding regions

(2012) Anja Linnemann et al.   JOURNAL OF MUSCLE RESEARCH AND CELL MOTILITY

Top-down Targeted Proteomics for Deep Sequencing of Tropomyosin Isoforms

(2012) Ying Peng et al.   JOURNAL OF PROTEOME RESEARCH

Targeted Data Extraction of the MS/MS Spectra Generated by Data-independent Acquisition: A New Concept for Consistent and Accurate Proteome Analysis

(2012) Ludovic C. Gillet et al.   MOLECULAR & CELLULAR PROTEOMICS

The Proteomics Identifications (PRIDE) database and associated tools: status in 2013

(2012) Juan Antonio Vizcaíno et al.   NUCLEIC ACIDS RESEARCH

α-Catenin Localization and Sarcomere Self-Organization on N-Cadherin Adhesive Patterns Are Myocyte Contractility Driven

(2012) Anant Chopra et al.   PLoS One

Analysis of protein isoforms: Can we do it better?

(2012) Miroslava Stastna et al.   PROTEOMICS

Expression of Crip2, a LIM-domain-only protein, in the mouse cardiovascular system under physiological and pathological conditions

(2011) Tzu-Chieh Wei et al.   GENE EXPRESSION PATTERNS

Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega

(2011) F. Sievers et al.   Molecular Systems Biology

Reorganizing the protein space at the Universal Protein Resource (UniProt)

(2011)   NUCLEIC ACIDS RESEARCH

CD-HIT Suite: a web server for clustering and comparing biological sequences

(2010) Ying Huang et al.   BIOINFORMATICS

Molecular and Functional Characterization of a Novel Cardiac-Specific Human Tropomyosin Isoform

(2010) Sudarsan Rajan et al.   CIRCULATION

The sarcomeric Z-disc component myopodin is a multiadapter protein that interacts with filamin and α-actinin

(2010) Anja Linnemann et al.   EUROPEAN JOURNAL OF CELL BIOLOGY

Investigation of changes in skeletal muscle α-actin expression in normal and pathological human and mouse hearts

(2010) O’Neal Copeland et al.   JOURNAL OF MUSCLE RESEARCH AND CELL MOTILITY

XTandem Parser: An open-source library to parse and analyse X!Tandem MS/MS search results

(2010) Thilo Muth et al.   PROTEOMICS

MASPECTRAS 2: An integration and analysis platform for proteomic data

(2010) Ceereena Ubaida Mohien et al.   PROTEOMICS

OMSSA Parser: An open-source library to parse and extract data from OMSSA MS/MS search results

(2009) Harald Barsnes et al.   PROTEOMICS

An Unsupervised, Model-Free, Machine-Learning Combiner for Peptide Identifications from Tandem Mass Spectra

(2009) Nathan Edwards et al.   Clinical Proteomics

ProteoWizard: open source software for rapid proteomics tools development

(2008) Darren Kessner et al.   BIOINFORMATICS

α-Actinin structure and regulation

(2008) B. Sjöblom et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

An FHL1-containing complex within the cardiomyocyte sarcomere mediates hypertrophic biomechanical stress responses in mice

(2008) Farah Sheikh et al.   JOURNAL OF CLINICAL INVESTIGATION

Cardiac thin filament regulation

(2008) Tomoyoshi Kobayashi et al.   PFLUGERS ARCHIV-EUROPEAN JOURNAL OF PHYSIOLOGY