Exploring skyline for both MSE-based label-free proteomics and HRMS quantitation of small molecules
Published 2013 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Exploring skyline for both MSE-based label-free proteomics and HRMS quantitation of small molecules
Authors
Keywords
-
Journal
PROTEOMICS
Volume 14, Issue 2-3, Pages 169-180
Publisher
Wiley
Online
2013-12-05
DOI
10.1002/pmic.201300352
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Identification of Inhibitors of the Antibiotic-Resistance Target New Delhi Metallo-β-lactamase 1 by both Nanoelectrospray Ionization Mass Spectrometry and Ultrafiltration Liquid Chromatography/Mass Spectrometry Approaches
- (2013) Xin Chen et al. ANALYTICAL CHEMISTRY
- Relative Quantitation of Glycoisoforms of Intact Apolipoprotein C3 in Human Plasma by Liquid Chromatography–High-Resolution Mass Spectrometry
- (2013) Wenying Jian et al. ANALYTICAL CHEMISTRY
- Improving Qualitative and Quantitative Performance for MSE-based Label-free Proteomics
- (2013) Nicholas J. Bond et al. JOURNAL OF PROTEOME RESEARCH
- An Automated Pipeline for High-Throughput Label-Free Quantitative Proteomics
- (2013) Hendrik Weisser et al. JOURNAL OF PROTEOME RESEARCH
- Reprogramming- and pluripotency-associated membrane proteins in mouse stem cells revealed by label-free quantitative proteomics
- (2013) Jie Hao et al. Journal of Proteomics
- An insight into iTRAQ: where do we stand now?
- (2012) Caroline Evans et al. ANALYTICAL AND BIOANALYTICAL CHEMISTRY
- Statistical protein quantification and significance analysis in label-free LC-MS experiments with complex designs
- (2012) Timothy Clough et al. BMC BIOINFORMATICS
- Diffprot — software for non-parametric statistical analysis of differential proteomics data
- (2012) Agata Malinowska et al. Journal of Proteomics
- Sperm phosphoproteome profiling by ultra performance liquid chromatography followed by data independent analysis (LC–MSE) reveals altered proteomic signatures in asthenozoospermia
- (2012) Priyanka P. Parte et al. Journal of Proteomics
- Targeted Proteomics of the Eicosanoid Biosynthetic Pathway Completes an Integrated Genomics-Proteomics-Metabolomics Picture of Cellular Metabolism
- (2012) Eduard Sabidó et al. MOLECULAR & CELLULAR PROTEOMICS
- Platform-independent and Label-free Quantitation of Proteomic Data Using MS1 Extracted Ion Chromatograms in Skyline
- (2012) Birgit Schilling et al. MOLECULAR & CELLULAR PROTEOMICS
- Targeted Data Extraction of the MS/MS Spectra Generated by Data-independent Acquisition: A New Concept for Consistent and Accurate Proteome Analysis
- (2012) Ludovic C. Gillet et al. MOLECULAR & CELLULAR PROTEOMICS
- Selected reaction monitoring–based proteomics: workflows, potential, pitfalls and future directions
- (2012) Paola Picotti et al. NATURE METHODS
- Quantification of proteins using data-independent analysis (MSE) in simple andcomplex samples: A systematic evaluation
- (2011) Yishai Levin et al. PROTEOMICS
- Less label, more free: Approaches in label-free quantitative mass spectrometry
- (2011) Karlie A. Neilson et al. PROTEOMICS
- Metabolite identification and quantitation in LC-MS/MS-based metabolomics
- (2011) Jun Feng Xiao et al. TRAC-TRENDS IN ANALYTICAL CHEMISTRY
- Driving efficiency in a high-throughput metabolic stability assay through a generic high-resolution accurate mass method and automated data mining
- (2011) Wenqing Shui et al. Protein & Cell
- A structural view of the antibiotic degradation enzyme NDM-1 from a superbug
- (2011) Yu Guo et al. Protein & Cell
- Skyline: an open source document editor for creating and analyzing targeted proteomics experiments
- (2010) Brendan MacLean et al. BIOINFORMATICS
- Proteomics on an Orbitrap Benchtop Mass Spectrometer Using All-ion Fragmentation
- (2010) Tamar Geiger et al. MOLECULAR & CELLULAR PROTEOMICS
- Precursor Acquisition Independent From Ion Count: How to Dive Deeper into the Proteomics Ocean
- (2009) Alexandre Panchaud et al. ANALYTICAL CHEMISTRY
- MSQuant, an Open Source Platform for Mass Spectrometry-Based Quantitative Proteomics
- (2009) Peter Mortensen et al. JOURNAL OF PROTEOME RESEARCH
- High-throughput generation of selected reaction-monitoring assays for proteins and proteomes
- (2009) Paola Picotti et al. NATURE METHODS
- Database searching and accounting of multiplexed precursor and product ion spectra from the data independent analysis of simple and complex peptide mixtures
- (2009) Guo-Zhong Li et al. PROTEOMICS
- The detection, correlation, and comparison of peptide precursor and product ions from data independent LC-MS with data dependant LC-MS/MS
- (2009) Scott J. Geromanos et al. PROTEOMICS
- An Assessment of Software Solutions for the Analysis of Mass Spectrometry Based Quantitative Proteomics Data
- (2008) Lukas N. Mueller et al. JOURNAL OF PROTEOME RESEARCH
- MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification
- (2008) Jürgen Cox et al. NATURE BIOTECHNOLOGY
- Alignment of LC-MS images, with applications to biomarker discovery and protein identification
- (2008) Mathias Vandenbogaert et al. PROTEOMICS
- Post alignment clustering procedure for comparative quantitative proteomics LC-MS Data
- (2007) Joost C. W. de Groot et al. PROTEOMICS
Create your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create NowBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started