Proteomics approaches to identify mono-(ADP-ribosyl)ated and poly(ADP-ribosyl)ated proteins

Distribution of protein poly(ADP-ribosyl)ation systems across all domains of life

(2014) Dragutin Perina et al.   DNA REPAIR

Poly(ADP-ribose): An organizer of cellular architecture

(2014) Anthony K.L. Leung   JOURNAL OF CELL BIOLOGY

Phosphoproteomic Approach to Characterize Protein Mono- and Poly(ADP-ribosyl)ation Sites from Cells

(2014) Casey M. Daniels et al.   JOURNAL OF PROTEOME RESEARCH

Engineering the Substrate Specificity of ADP-Ribosyltransferases for Identifying Direct Protein Targets

(2014) Ian Carter-O’Connell et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Crystallographic and Biochemical Analysis of the Mouse Poly(ADP-Ribose) Glycohydrolase

(2014) Zhizhi Wang et al.   PLoS One

Family-wide analysis of poly(ADP-ribose) polymerase activity

(2014) Sejal Vyas et al.   Nature Communications

Quantification of Cellular Poly(ADP-ribosyl)ation by Stable Isotope Dilution Mass Spectrometry Reveals Tissue- and Drug-Dependent Stress Response Dynamics

(2013) Rita Martello et al.   ACS Chemical Biology

ARTD10 substrate identification on protein microarrays: regulation of GSK3β by mono-ADP-ribosylation

(2013) Karla LH Feijs et al.   Cell Communication and Signaling

Deficiency of terminal ADP-ribose protein glycohydrolase TARG1/C6orf130 in neurodegenerative disease

(2013) Reza Sharifi et al.   EMBO JOURNAL

Mapping PARP-1 Auto-ADP-ribosylation Sites by Liquid Chromatography–Tandem Mass Spectrometry

(2013) John D Chapman et al.   JOURNAL OF PROTEOME RESEARCH

Structural biology of the writers, readers, and erasers in mono- and poly(ADP-ribose) mediated signaling

(2013) Tobias Karlberg et al.   MOLECULAR ASPECTS OF MEDICINE

Poly(ADP-ribose): PARadigms and PARadoxes

(2013) Alexander Bürkle et al.   MOLECULAR ASPECTS OF MEDICINE

Crosstalk between poly(ADP-ribose) polymerase and sirtuin enzymes

(2013) Carles Cantó et al.   MOLECULAR ASPECTS OF MEDICINE

Proteome-wide Identification of Poly(ADP-Ribosyl)ation Targets in Different Genotoxic Stress Responses

(2013) Stephanie Jungmichel et al.   MOLECULAR CELL

Site-specific characterization of the Asp- and Glu-ADP-ribosylated proteome

(2013) Yajie Zhang et al.   NATURE METHODS

PARP inhibitors bounce back

(2013) Ken Garber   NATURE REVIEWS DRUG DISCOVERY

Macrodomain-containing proteins: regulating new intracellular functions of mono(ADP-ribosyl)ation

(2013) Karla L. H. Feijs et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Macrodomain-containing proteins are new mono-ADP-ribosylhydrolases

(2013) Florian Rosenthal et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

A family of macrodomain proteins reverses cellular mono-ADP-ribosylation

(2013) Gytis Jankevicius et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Recognition of Mono-ADP-Ribosylated ARTD10 Substrates by ARTD8 Macrodomains

(2013) Alexandra H. Forst et al.   STRUCTURE

Poly(ADP-ribose) binding to Chk1 at stalled replication forks is required for S-phase checkpoint activation

(2013) WooKee Min et al.   Nature Communications

Identification of ADP-ribosylation sites of CD38 mutants by precursor ion scanning mass spectrometry

(2012) Hong Jiang et al.   ANALYTICAL BIOCHEMISTRY

Recognition of the iso-ADP-ribose moiety in poly(ADP-ribose) by WWE domains suggests a general mechanism for poly(ADP-ribosyl)ation-dependent ubiquitination

(2012) Z. Wang et al.   GENES & DEVELOPMENT

ADP-ribosylhydrolase 3 (ARH3), Not Poly(ADP-ribose) Glycohydrolase (PARG) Isoforms, Is Responsible for Degradation of Mitochondrial Matrix-associated Poly(ADP-ribose)

(2012) Marc Niere et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Quantitative proteomics and dynamic imaging reveal that G3BP-mediated stress granule assembly is poly(ADP-ribose)-dependent following exposure to MNNG-induced DNA alkylation

(2012) M. Isabelle et al.   JOURNAL OF CELL SCIENCE

Reprogramming cellular events by poly(ADP-ribose)-binding proteins

(2012) Jana Krietsch et al.   MOLECULAR ASPECTS OF MEDICINE

Inheritance of Silent rDNA Chromatin Is Mediated by PARP1 via Noncoding RNA

(2012) Claudio Guetg et al.   MOLECULAR CELL

Reanalysis of phosphoproteomics data uncovers ADP-ribosylation sites

(2012) Ivan Matic et al.   NATURE METHODS

New insights into the molecular and cellular functions of poly(ADP-ribose) and PARPs

(2012) Bryan A. Gibson et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Structure of mammalian poly(ADP-ribose) glycohydrolase reveals a flexible tyrosine clasp as a substrate-binding element

(2012) In-Kwon Kim et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Quantitative proteomics profiling of the poly(ADP-ribose)-related response to genotoxic stress

(2012) Jean-Philippe Gagné et al.   NUCLEIC ACIDS RESEARCH

New readers and interpretations of poly(ADP-ribosyl)ation

(2012) Thomas Kalisch et al.   TRENDS IN BIOCHEMICAL SCIENCES

A unique boronic acid functionalized monolithic capillary for specific capture, separation and immobilization of cis-diol biomolecules

(2011) Yunchun Liu et al.   CHEMICAL COMMUNICATIONS

Identification of candidate substrates for poly(ADP-ribose) polymerase-2 (PARP2) in the absence of DNA damage using high-density protein microarrays

(2011) Sonia Troiani et al.   FEBS Journal

A review of tandem mass spectrometry characterization of adenosine diphosphate-ribosylated peptides

(2011) Shawna M. Hengel et al.   INTERNATIONAL JOURNAL OF MASS SPECTROMETRY

Identification of Macrodomain Proteins as NovelO-Acetyl-ADP-ribose Deacetylases

(2011) Dawei Chen et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Strategies for the identification of arginine ADP-ribosylation sites

(2011) Sabrina Laing et al.   Journal of Proteomics

Poly(ADP-Ribose) Regulates Stress Responses and MicroRNA Activity in the Cytoplasm

(2011) Anthony K.L. Leung et al.   MOLECULAR CELL

Activator-Induced Spread of Poly(ADP-Ribose) Polymerase Promotes Nucleosome Loss at Hsp70

(2011) Steven J. Petesch et al.   MOLECULAR CELL

The structure and catalytic mechanism of a poly(ADP-ribose) glycohydrolase

(2011) Dea Slade et al.   NATURE

RNF146 is a poly(ADP-ribose)-directed E3 ligase that regulates axin degradation and Wnt signalling

(2011) Yue Zhang et al.   NATURE CELL BIOLOGY

Ubiquitin Ligase RNF146 Regulates Tankyrase and Axin to Promote Wnt Signaling

(2011) Marinella G. Callow et al.   PLoS One

Iduna is a poly(ADP-ribose) (PAR)-dependent E3 ubiquitin ligase that regulates DNA damage

(2011) H. C. Kang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

SIRT6 Promotes DNA Repair Under Stress by Activating PARP1

(2011) Z. Mao et al.   SCIENCE

Poly(ADP-ribosyl)ation in plants

(2011) Amy G. Briggs et al.   TRENDS IN PLANT SCIENCE

High-Affinity Interaction of Poly(ADP-ribose) and the Human DEK Oncoprotein Depends upon Chain Length

(2010) Jörg Fahrer et al.   BIOCHEMISTRY

Resveratrol: a relevant pharmacological approach for the treatment of metabolic syndrome?

(2010) Jean-Louis Beaudeux et al.   CURRENT OPINION IN CLINICAL NUTRITION AND METABOLIC CARE

Method for the Synthesis of Mono-ADP-ribose Conjugated Peptides

(2010) Peter M. Moyle et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Clickable NAD Analogues for Labeling Substrate Proteins of Poly(ADP-ribose) Polymerases

(2010) Hong Jiang et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

PARP1 ADP-ribosylates lysine residues of the core histone tails

(2010) Simon Messner et al.   NUCLEIC ACIDS RESEARCH

Sequence assignment of ADP-ribosylated peptides is facilitated as peptide length increases

(2010) Shawna M. Hengel et al.   RAPID COMMUNICATIONS IN MASS SPECTROMETRY

Toward a unified nomenclature for mammalian ADP-ribosyltransferases

(2010) Michael O. Hottiger et al.   TRENDS IN BIOCHEMICAL SCIENCES

Electron Transfer Dissociation Facilitates Sequencing of Adenosine Diphosphate-Ribosylated Peptides

(2009) Barry M. Zee et al.   ANALYTICAL CHEMISTRY

Sirtuin inhibitors

(2009) Francisco J Alcaín et al.   EXPERT OPINION ON THERAPEUTIC PATENTS

Mass spectrometric characterization of the covalent modification of the nitrogenase Fe-protein in Azoarcus sp. BH72

(2009) Janina Oetjen et al.   FEBS Journal

Identification of the ADP-Ribosylation Sites in the PARP-1 Automodification Domain: Analysis and Implications

(2009) Zhihua Tao et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Mutational Analysis of the Poly(ADP-Ribosyl)ation Sites of the Transcription Factor CTCF Provides an Insight into the Mechanism of Its Regulation by Poly(ADP-Ribosyl)ation

(2009) D. Farrar et al.   MOLECULAR AND CELLULAR BIOLOGY

Recent progress in the biology and physiology of sirtuins

(2009) Toren Finkel et al.   NATURE

A macrodomain-containing histone rearranges chromatin upon sensing PARP1 activation

(2009) Gyula Timinszky et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Combining affinity purification by ADP-ribose-binding macro domains with mass spectrometry to define the mammalian ADP-ribosyl proteome

(2009) N. Dani et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Poly(ADP-ribose)-Dependent Regulation of DNA Repair by the Chromatin Remodeling Enzyme ALC1

(2009) D. Ahel et al.   SCIENCE

Mammalian ADP-ribosyltransferases and ADP-ribosylhydrolases

(2008) Friedrich Koch-Nolte   Frontiers in Bioscience-Landmark

Tandem mass spectrometry investigation of ADP-ribosylated kemptide

(2008) Shawna M. Hengel et al.   JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY

Proteome-wide identification of poly(ADP-ribose) binding proteins and poly(ADP-ribose)-associated protein complexes

(2008) Jean-Philippe Gagné et al.   NUCLEIC ACIDS RESEARCH

The diverse biological roles of mammalian PARPS, a small but powerful family of poly-ADP-ribose polymerases

(2007) Paul et al.   Frontiers in Bioscience-Landmark

A new detection method for arginine-specific ADP-ribosylation of protein — A combinational use of anti-ADP-ribosylarginine antibody and ADP-ribosylarginine hydrolase

(2007) Harumi Osago et al.