Functional evolution of PLP-dependent enzymes based on active-site structural similarities

Crystal structure of the ω-aminotransferase fromParacoccus denitrificansand its phylogenetic relationship with other class III amino- transferases that have biotechnological potential

(2013) Christian Rausch et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Evidence of non-random mutation rates suggests an evolutionary risk management strategy

(2012) Iñigo Martincorena et al.   NATURE

Dendroscope 3: An Interactive Tool for Rooted Phylogenetic Trees and Networks

(2012) Daniel H. Huson et al.   SYSTEMATIC BIOLOGY

Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega

(2011) F. Sievers et al.   Molecular Systems Biology

Origins, evolution, and phenotypic impact of new genes

(2010) H. Kaessmann   GENOME RESEARCH

Genomic and structural aspects of protein evolution

(2009) Cyrus Chothia et al.   BIOCHEMICAL JOURNAL

The B6 database: a tool for the description and classification of vitamin B6-dependent enzymatic activities and of the corresponding protein families

(2009) Riccardo Percudani et al.   BMC BIOINFORMATICS

Partially-supervised protein subclass discovery with simultaneous annotation of functional residues

(2009) Benjamin Georgi et al.   BMC STRUCTURAL BIOLOGY

Applications of next-generation sequencing technologies in functional genomics

(2008) Olena Morozova et al.   GENOMICS

PROMALS3D: a tool for multiple protein sequence and structure alignments

(2008) Jimin Pei et al.   NUCLEIC ACIDS RESEARCH