- Home
- Publications
- Publication Search
- Publication Details
Title
Assessment of ligand binding site predictions in CASP10
Authors
Keywords
-
Journal
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
Volume 82, Issue -, Pages 154-163
Publisher
Wiley
Online
2013-12-14
DOI
10.1002/prot.24495
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- OpenStructure: an integrated software framework for computational structural biology
- (2013) M. Biasini et al. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY
- Challenging the state of the art in protein structure prediction: Highlights of experimental target structures for the 10th Critical Assessment of Techniques for Protein Structure Prediction Experiment CASP10
- (2013) Andriy Kryshtafovych et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Protein Modeling: What Happened to the “Protein Structure Gap”?
- (2013) Torsten Schwede STRUCTURE
- Domain enhanced lookup time accelerated BLAST
- (2012) Grzegorz M Boratyn et al. Biology Direct
- Crystal Structure of Reduced MsAcg, a Putative Nitroreductase fromMycobacterium smegmatisand a Close Homologue ofMycobacterium tuberculosisAcg
- (2012) François-Xavier Chauviac et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- BioLiP: a semi-manually curated database for biologically relevant ligand–protein interactions
- (2012) Jianyi Yang et al. NUCLEIC ACIDS RESEARCH
- The CRISPR Associated Protein Cas4 Is a 5′ to 3′ DNA Exonuclease with an Iron-Sulfur Cluster
- (2012) Jing Zhang et al. PLoS One
- Templates are available to model nearly all complexes of structurally characterized proteins
- (2012) P. J. Kundrotas et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Three-dimensional modeling of protein interactions and complexes is going ‘omics
- (2011) Amelie Stein et al. CURRENT OPINION IN STRUCTURAL BIOLOGY
- Assessment of ligand-binding residue predictions in CASP9
- (2011) Tobias Schmidt et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- CASP9 assessment of free modeling target predictions
- (2011) Lisa Kinch et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Assessment of template based protein structure predictions in CASP9
- (2011) Valerio Mariani et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- UniProt Knowledgebase: a hub of integrated protein data
- (2011) M. Magrane et al. Database-The Journal of Biological Databases and Curation
- The binding site distance test score: a robust method for the assessment of predicted protein binding sites
- (2010) Daniel B. Roche et al. BIOINFORMATICS
- OpenStructure: a flexible software framework for computational structural biology
- (2010) Marco Biasini et al. BIOINFORMATICS
- 3DLigandSite: predicting ligand-binding sites using similar structures
- (2010) Mark N. Wass et al. NUCLEIC ACIDS RESEARCH
- The protein common interface database (ProtCID)--a comprehensive database of interactions of homologous proteins in multiple crystal forms
- (2010) Q. Xu et al. NUCLEIC ACIDS RESEARCH
- Evidence for PDZ domains in bacteria, yeast, and plants
- (2010) Christopher P. Ponting PROTEIN SCIENCE
- EasyMIFs and SiteHound: a toolkit for the identification of ligand-binding sites in protein structures
- (2009) Dario Ghersi et al. BIOINFORMATICS
- An Iron-Sulfur Cluster Is Essential for the Binding of Broken DNA by AddAB-type Helicase-Nucleases
- (2009) Joseph T. P. Yeeles et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Assessment of ligand binding residue predictions in CASP8
- (2009) Gonzalo López et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Predicting Protein Ligand Binding Sites by Combining Evolutionary Sequence Conservation and 3D Structure
- (2009) John A. Capra et al. PLoS Computational Biology
- Prediction of protein functional residues from sequence by probability density estimation
- (2008) J. D. Fischer et al. BIOINFORMATICS
- Protein Functional Surfaces: Global Shape Matching and Local Spatial Alignments of Ligand Binding Sites
- (2008) T. ANDREW Binkowski et al. BMC STRUCTURAL BIOLOGY
Find the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
SearchBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started