lobChIP: from cells to sequencing ready ChIP libraries in a single day
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Title
lobChIP: from cells to sequencing ready ChIP libraries in a single day
Authors
Keywords
ChIP-seq, Chromatin immunoprecipitation, Illumina, NGS, Library preparation
Journal
Epigenetics & Chromatin
Volume 8, Issue 1, Pages -
Publisher
Springer Nature
Online
2015-07-20
DOI
10.1186/s13072-015-0017-5
References
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Related references
Note: Only part of the references are listed.- TELP, a sensitive and versatile library construction method for next-generation sequencing
- (2014) Xu Peng et al. NUCLEIC ACIDS RESEARCH
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- (2014) William C. Gasper et al. Scientific Reports
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- (2014) Geoffrey Berguet et al. Jove-Journal of Visualized Experiments
- Coordinated Effects of Sequence Variation on DNA Binding, Chromatin Structure, and Transcription
- (2013) H. Kilpinen et al. SCIENCE
- AHT-ChIP-seq: a completely automated robotic protocol for high-throughput chromatin immunoprecipitation
- (2013) Sarah Aldridge et al. GENOME BIOLOGY
- A High-Throughput Chromatin Immunoprecipitation Approach Reveals Principles of Dynamic Gene Regulation in Mammals
- (2012) Manuel Garber et al. MOLECULAR CELL
- Cell type-specific binding patterns reveal that TCF7L2 can be tethered to the genome by association with GATA3
- (2012) Seth Frietze et al. GENOME BIOLOGY
- MEME-ChIP: motif analysis of large DNA datasets
- (2011) Philip Machanick et al. BIOINFORMATICS
- Linear amplification for deep sequencing
- (2011) Wieteke A M Hoeijmakers et al. Nature Protocols
- seqMINER: an integrated ChIP-seq data interpretation platform
- (2010) Tao Ye et al. NUCLEIC ACIDS RESEARCH
- The Sequence Alignment/Map format and SAMtools
- (2009) H. Li et al. BIOINFORMATICS
- Fast and accurate short read alignment with Burrows-Wheeler transform
- (2009) H. Li et al. BIOINFORMATICS
- Molecular interactions between HNF4a, FOXA2 and GABP identified at regulatory DNA elements through ChIP-sequencing
- (2009) Ola Wallerman et al. NUCLEIC ACIDS RESEARCH
- Differential binding and co-binding pattern of FOXA1 and FOXA3 and their relation to H3K4me3 in HepG2 cells revealed by ChIP-seq
- (2009) Mehdi Motallebipour et al. GENOME BIOLOGY
- Model-based Analysis of ChIP-Seq (MACS)
- (2008) Yong Zhang et al. GENOME BIOLOGY
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