Identification and comparison of key RNA interference machinery from western corn rootworm, fall armyworm, and southern green stink bug

Distinct fitness costs associated with the knockdown of RNAi pathway genes in western corn rootworm adults

(2017) Ke Wu et al.   PLoS One

Two genomes of highly polyphagous lepidopteran pests (Spodoptera frugiperda, Noctuidae) with different host-plant ranges

(2017) Anaïs Gouin et al.   Scientific Reports

In vivo study of Dicer-2-mediated immune response of the small interfering RNA pathway upon systemic infections of virulent and avirulent viruses in Bombus terrestris

(2016) Jinzhi Niu et al.   INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY

RNA interference in the Colorado potato beetle, Leptinotarsa decemlineata : Identification of key contributors

(2016) June-Sun Yoon et al.   INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY

Variation in RNAi efficacy among insect species is attributable to dsRNA degradation in vivo

(2016) Kangxu Wang et al.   INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY

The involvement of clathrin-mediated endocytosis and two Sid-1-like transmembrane proteins in double-stranded RNA uptake in the Colorado potato beetle midgut

(2016) K. Cappelle et al.   INSECT MOLECULAR BIOLOGY

Emerging Agricultural Biotechnologies for Sustainable Agriculture and Food Security

(2016) Jennifer A. Anderson et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

(2016) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Structural and functional insights into the fly microRNA biogenesis factor Loquacious

(2016) Leonhard Jakob et al.   RNA

Variation and Evolution in the Glutamine-Rich Repeat Region of Drosophila Argonaute-2

(2016) William H. Palmer et al.   G3-Genes Genomes Genetics

Knockdown of RNA Interference Pathway Genes in Western Corn Rootworms (Diabrotica virgifera virgifera Le Conte) Demonstrates a Possible Mechanism of Resistance to Lethal dsRNA

(2016) Ana María Vélez et al.   PLoS One

Core RNAi Machinery and Three Sid-1 Related Genes in Spodoptera litura (Fabricius)

(2015) Liang Gong et al.   INTERNATIONAL JOURNAL OF AGRICULTURE AND BIOLOGY

From guide to target: molecular insights into eukaryotic RNA-interference machinery

(2015) Jonathan J Ipsaro et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

The hub protein loquacious connects the microRNA and short interfering RNA pathways in mosquitoes

(2015) Mary Etna Haac et al.   NUCLEIC ACIDS RESEARCH

The Pfam protein families database: towards a more sustainable future

(2015) Robert D. Finn et al.   NUCLEIC ACIDS RESEARCH

New insights into an RNAi approach for plant defence against piercing-sucking and stem-borer insect pests

(2015) Haichao Li et al.   PLANT CELL AND ENVIRONMENT

From guide to target: molecular insights into eukaryotic RNA-interference machinery

(2015) Jonathan J Ipsaro et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Endocytic pathway mediates refractoriness of insect Bactrocera dorsalis to RNA interference

(2015) Xiaoxue Li et al.   Scientific Reports

RNA interference-mediated antiviral defense in insects

(2015) Don B Gammon et al.   Current Opinion in Insect Science

SOAPdenovo-Trans: de novo transcriptome assembly with short RNA-Seq reads

(2014) Y. Xie et al.   BIOINFORMATICS

Genome wide screening of RNAi factors of Sf21 cells reveal several novel pathway associated proteins

(2014) Subhanita Ghosh et al.   BMC GENOMICS

Plant-Generated Artificial Small RNAs Mediated Aphid Resistance

(2014) Hongyan Guo et al.   PLoS One

Establishing an In Vivo Assay System to Identify Components Involved in Environmental RNA Interference in the Western Corn Rootworm

(2014) Keita Miyata et al.   PLoS One

Drosha as an interferon-independent antiviral factor

(2014) J. S. Shapiro et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Recent progress in RNAi research in Lepidoptera: intracellular machinery, antiviral immune response and prospects for insect pest control

(2014) Anna Kolliopoulou et al.   Current Opinion in Insect Science

The challenge of RNAi-mediated control of hemipterans

(2014) Olivier Christiaens et al.   Current Opinion in Insect Science

Molecular Mechanisms of RNA Interference

(2013) Ross C. Wilson et al.   Annual Review of Biophysics

DoMosaics: software for domain arrangement visualization and domain-centric analysis of proteins

(2013) A. D. Moore et al.   BIOINFORMATICS

A Retrotransposon-Driven Dicer Isoform Directs Endogenous Small Interfering RNA Production in Mouse Oocytes

(2013) Matyas Flemr et al.   CELL

Colorado potato beetle (Coleoptera) gut transcriptome analysis: expression of RNA interference-related genes

(2013) L. Swevers et al.   INSECT MOLECULAR BIOLOGY

Genome-wide screening for components of small interfering RNA (siRNA) and micro-RNA (miRNA) pathways in the brown planthopper,Nilaparvata lugens(Hemiptera: Delphacidae)

(2013) H-J. Xu et al.   INSECT MOLECULAR BIOLOGY

Core RNAi Machinery and Sid1, a Component for Systemic RNAi, in the Hemipteran Insect, Aphis glycines

(2013) Raman Bansal et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Transcriptional response of BmToll9-1 and RNAi machinery genes to exogenous dsRNA in the midgut of Bombyx mori

(2013) Jisheng Liu et al.   JOURNAL OF INSECT PHYSIOLOGY

Expression of germline markers in three species of amphioxus supports a preformation mechanism of germ cell development in cephalochordates

(2013) Qiu-Jin Zhang et al.   EvoDevo

Oases: robust de novo RNA-seq assembly across the dynamic range of expression levels

(2012) Marcel H. Schulz et al.   BIOINFORMATICS

IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth

(2012) Y. Peng et al.   BIOINFORMATICS

Induction of RNA interference genes by double-stranded RNA; implications for susceptibility to RNA interference

(2012) Jennie S. Garbutt et al.   INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

Phosphate and R2D2 Restrict the Substrate Specificity of Dicer-2, an ATP-Driven Ribonuclease

(2011) Elif Sarinay Cenik et al.   MOLECULAR CELL

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

Search for Limiting Factors in the RNAi Pathway in Silkmoth Tissues and the Bm5 Cell Line: The RNA-Binding Proteins R2D2 and Translin

(2011) Luc Swevers et al.   PLoS One

A Phagocytic Route for Uptake of Double-Stranded RNA in RNAi

(2011) João J. E. Rocha et al.   PLoS One

Regulation of mRNA Translation and Stability by microRNAs

(2010) Marc Robert Fabian et al.   Annual Review of Biochemistry

Crystal structure and ligand binding of the MID domain of a eukaryotic Argonaute protein

(2010) Andreas Boland et al.   EMBO REPORTS

RNAi-mediated knockdown of a Spodoptera frugiperda trypsin-like serine-protease gene reduces susceptibility to a Bacillus thuringiensis Cry1Ca1 protoxin

(2010) Lianet Rodríguez-Cabrera et al.   ENVIRONMENTAL MICROBIOLOGY

The developmental transcriptome of Drosophila melanogaster

(2010) Brenton R. Graveley et al.   NATURE

Natural Variation of the Amino-Terminal Glutamine-Rich Domain in Drosophila Argonaute2 Is Not Associated with Developmental Defects

(2010) Daniel Hain et al.   PLoS One

Origins and Mechanisms of miRNAs and siRNAs

(2009) Richard W. Carthew et al.   CELL

Endo-siRNAs depend on a new isoform of loquacious and target artificially introduced, high-copy sequences

(2009) Julia Verena Hartig et al.   EMBO JOURNAL

Systematic identification of cell cycle-dependent yeast nucleocytoplasmic shuttling proteins by prediction of composite motifs

(2009) S. Kosugi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Processing of Drosophila endo-siRNAs depends on a specific Loquacious isoform

(2009) R. Zhou et al.   RNA

Characterization of the miRNA-RISC loading complex and miRNA-RISC formed in the Drosophila miRNA pathway

(2009) K. Miyoshi et al.   RNA

Aedes aegypti uses RNA interference in defense against Sindbis virus infection

(2008) Corey L Campbell et al.   BMC MICROBIOLOGY

RNA interference with the allatoregulating neuropeptide genes from the fall armyworm Spodoptera frugiperda and its effects on the JH titer in the hemolymph

(2008) Manuela Griebler et al.   JOURNAL OF INSECT PHYSIOLOGY

An Improved General Amino Acid Replacement Matrix

(2008) S. Q. Le et al.   MOLECULAR BIOLOGY AND EVOLUTION

Structure of the guide-strand-containing argonaute silencing complex

(2008) Yanli Wang et al.   NATURE

Exploring systemic RNA interference in insects: a genome-wide survey for RNAi genes in Tribolium

(2008) Yoshinori Tomoyasu et al.   GENOME BIOLOGY