A technique for setting analytical thresholds in massively parallel sequencing-based forensic DNA analysis
Published 2017 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
A technique for setting analytical thresholds in massively parallel sequencing-based forensic DNA analysis
Authors
Keywords
Background noise (acoustics), Sequence motif analysis, Forensics, Genetic loci, Background signal noise, Polymerase chain reaction, DNA analysis, Sequence assembly tools
Journal
PLoS One
Volume 12, Issue 5, Pages e0178005
Publisher
Public Library of Science (PLoS)
Online
2017-05-26
DOI
10.1371/journal.pone.0178005
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- FDSTools: A software package for analysis of massively parallel sequencing data with the ability to recognise and correct STR stutter and other PCR or sequencing noise
- (2017) Jerry Hoogenboom et al. Forensic Science International-Genetics
- Evaluation of the Illumina ® Beta Version ForenSeq™ DNA Signature Prep Kit for use in genetic profiling
- (2016) Jennifer D. Churchill et al. Forensic Science International-Genetics
- Evaluation of the Early Access STR Kit v1 on the Ion Torrent PGM™ platform
- (2016) Fei Guo et al. Forensic Science International-Genetics
- Massively parallel sequencing of 68 insertion/deletion markers identifies novel microhaplotypes for utility in human identity testing
- (2016) Frank R. Wendt et al. Forensic Science International-Genetics
- Introduction of the Python script STRinNGS for analysis of STR regions in FASTQ or BAM files and expansion of the Danish STR sequence database to 11 STRs
- (2016) Susanne L. Friis et al. Forensic Science International-Genetics
- Characterization of genetic sequence variation of 58 STR loci in four major population groups
- (2016) Nicole M.M. Novroski et al. Forensic Science International-Genetics
- Blind study evaluation illustrates utility of the Ion PGM™ system for use in human identity DNA typing
- (2015) Jennifer D. Churchill et al. CROATIAN MEDICAL JOURNAL
- Second-generation sequencing of forensic STRs using the Ion Torrent™ HID STR 10-plex and the Ion PGM™
- (2015) Sarah L. Fordyce et al. Forensic Science International-Genetics
- Towards simultaneous individual and tissue identification: A proof-of-principle study on parallel sequencing of STRs, amelogenin, and mRNAs with the Ion Torrent PGM
- (2015) D. Zubakov et al. Forensic Science International-Genetics
- An evaluation of the PowerSeq™ Auto System: A multiplex short tandem repeat marker kit compatible with massively parallel sequencing
- (2015) Xiangpei Zeng et al. Forensic Science International-Genetics
- Insight into biases and sequencing errors for amplicon sequencing with the Illumina MiSeq platform
- (2015) Melanie Schirmer et al. NUCLEIC ACIDS RESEARCH
- Short tandem repeat typing on the 454 platform: Strategies and considerations for targeted sequencing of common forensic markers
- (2014) Melissa Scheible et al. Forensic Science International-Genetics
- Internal validation of the GlobalFiler™ Express PCR Amplification Kit for the direct amplification of reference DNA samples on a high-throughput automated workflow
- (2014) Shahida Flores et al. Forensic Science International-Genetics
- STRait Razor: A length-based forensic STR allele-calling tool for use with second generation sequencing data
- (2013) David H. Warshauer et al. Forensic Science International-Genetics
- My-Forensic-Loci-queries (MyFLq) framework for analysis of forensic STR data generated by massive parallel sequencing
- (2013) Christophe Van Neste et al. Forensic Science International-Genetics
- Shining a Light on Dark Sequencing: Characterising Errors in Ion Torrent PGM Data
- (2013) Lauren M. Bragg et al. PLoS Computational Biology
- Analytical Thresholds and Sensitivity: Establishing RFU Thresholds for Forensic DNA Analysis,
- (2012) Joli Bregu et al. JOURNAL OF FORENSIC SCIENCES
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started