Computational prediction of the tolerance to amino-acid deletion in green-fluorescent protein
Published 2017 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Computational prediction of the tolerance to amino-acid deletion in green-fluorescent protein
Authors
Keywords
-
Journal
PLoS One
Volume 12, Issue 4, Pages e0164905
Publisher
Public Library of Science (PLoS)
Online
2017-04-04
DOI
10.1371/journal.pone.0164905
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Causes of evolutionary rate variation among protein sites
- (2016) Julian Echave et al. NATURE REVIEWS GENETICS
- Intermediate divergence levels maximize the strength of structure-sequence correlations in enzymes and viral proteins
- (2016) Eleisha L. Jackson et al. PROTEIN SCIENCE
- Dissecting the roles of local packing density and longer-range effects in protein sequence evolution
- (2016) Amir Shahmoradi et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Too packed to change: side-chain packing and site-specific substitution rates in protein evolution
- (2015) María Laura Marcos et al. PeerJ
- A mechanistic stress model of protein evolution accounts for site-specific evolutionary rates and their relationship with packing density and flexibility
- (2014) Tsun-Tsao Huang et al. BMC EVOLUTIONARY BIOLOGY
- Predicting Evolutionary Site Variability from Structure in Viral Proteins: Buriedness, Packing, Flexibility, and Design
- (2014) Amir Shahmoradi et al. JOURNAL OF MOLECULAR EVOLUTION
- Random Single Amino Acid Deletion Sampling Unveils Structural Tolerance and the Benefits of Helical Registry Shift on GFP Folding and Structure
- (2014) James A.J. Arpino et al. STRUCTURE
- Protein Insertions and Deletions Enabled by Neutral Roaming in Sequence Space
- (2013) Ágnes Tóth-Petróczy et al. MOLECULAR BIOLOGY AND EVOLUTION
- Protein Expansion Is Primarily due to Indels in Intrinsically Disordered Regions
- (2013) S. Light et al. MOLECULAR BIOLOGY AND EVOLUTION
- Site-Specific Structural Constraints on Protein Sequence Evolutionary Divergence: Local Packing Density versus Solvent Exposure
- (2013) So-Wei Yeh et al. MOLECULAR BIOLOGY AND EVOLUTION
- Scalable web services for the PSIPRED Protein Analysis Workbench
- (2013) Daniel W. A. Buchan et al. NUCLEIC ACIDS RESEARCH
- A Pareto-Optimal Refinement Method for Protein Design Scaffolds
- (2013) Lucas Gregorio Nivón et al. PLoS One
- Maximum Allowed Solvent Accessibilites of Residues in Proteins
- (2013) Matthew Z. Tien et al. PLoS One
- Relaxation of backbone bond geometry improves protein energy landscape modeling
- (2013) Patrick Conway et al. PROTEIN SCIENCE
- Pervasive Indels and Their Evolutionary Dynamics after the Fish-Specific Genome Duplication
- (2012) Baocheng Guo et al. MOLECULAR BIOLOGY AND EVOLUTION
- The Relationship Between Relative Solvent Accessibility and Evolutionary Rate in Protein Evolution
- (2011) Duncan C. Ramsey et al. GENETICS
- RosettaRemodel: A Generalized Framework for Flexible Backbone Protein Design
- (2011) Po-Ssu Huang et al. PLoS One
- Impact of Indels on the Flanking Regions in Structural Domains
- (2010) Zheng Zhang et al. MOLECULAR BIOLOGY AND EVOLUTION
- The Combined Effects of Amino Acid Substitutions and Indels on the Evolution of Structure within Protein Families
- (2010) Zheng Zhang et al. PLoS One
- Role of conformational sampling in computing mutation-induced changes in protein structure and stability
- (2010) Elizabeth H. Kellogg et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Systematic analysis of short internal indels and their impact on protein folding
- (2010) RyangGuk Kim et al. BMC STRUCTURAL BIOLOGY
- Structural Determinants of Protein Evolution Are Context-Sensitive at the Residue Level
- (2009) E. A. Franzosa et al. MOLECULAR BIOLOGY AND EVOLUTION
- Deriving protein dynamical properties from weighted protein contact number
- (2008) Chih-Peng Lin et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
Find the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
SearchAdd your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload Now