Testing the Efficacy of DNA Barcodes for Identifying the Vascular Plants of Canada

Evolutionary histories determine DNA barcoding success in vascular plants: seven case studies using intraspecific broad sampling of closely related species

(2016) Sofia Caetano Wyler et al.   BMC EVOLUTIONARY BIOLOGY

Phylogenetic relationships between Oxytropis DC. and Astragalus L.species native to an Old World diversity center inferred from nuclear ribosomal ITS and plastid matK gene sequences

(2016) Ayten DIZKIRICI TEKPINAR et al.   TURKISH JOURNAL OF BIOLOGY

Genetic and morphological evidence for introgression between three species of willows

(2015) Johan Fogelqvist et al.   BMC EVOLUTIONARY BIOLOGY

DNA barcoding: an efficient tool to overcome authentication challenges in the herbal market

(2015) Priyanka Mishra et al.   PLANT BIOTECHNOLOGY JOURNAL

DNA metabarcoding illuminates dietary niche partitioning by African large herbivores

(2015) Tyler R. Kartzinel et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Species delimitation and relationships: The dance of the seven veils

(2015) Yamama Naciri et al.   TAXON

Using phylogenomics to resolve mega-families: An example from Compositae

(2015) Jennifer R. Mandel et al.   Journal of Systematics and Evolution

Discrimination of grasshopper (Orthoptera: Acrididae) diet and niche overlap using next-generation sequencing of gut contents

(2015) Beverly McClenaghan et al.   Ecology and Evolution

DNA barcodes reveal microevolutionary signals in fire response trait in two legume genera

(2015) Abubakar Bello et al.   AoB Plants

Phylogenetic Relationships of American Willows (Salix L., Salicaceae)

(2015) Aurélien Lauron-Moreau et al.   PLoS One

Plant DNA barcoding: from gene to genome

(2014) Xiwen Li et al.   BIOLOGICAL REVIEWS

Understanding the spectacular failure of DNA barcoding in willows (Salix): Does this result from a trans-specific selective sweep?

(2014) Diana M. Percy et al.   MOLECULAR ECOLOGY

Plant DNA Detection from Grasshopper Guts: A Step-by-Step Protocol, from Tissue Preparation to Obtaining Plant DNA Sequences

(2014) Alina Avanesyan   Applications in Plant Sciences

Does relatedness matter? Phylogenetic density-dependent survival of seedlings in a tropical forest

(2013) Edwin Lebrija-Trejos et al.   ECOLOGY

The environment and space, not phylogeny, determine trait dispersion in a subtropical forest

(2013) Xiaojuan Liu et al.   FUNCTIONAL ECOLOGY

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

How Effective Are DNA Barcodes in the Identification of African Rainforest Trees?

(2013) Ingrid Parmentier et al.   PLoS One

DNA Barcoding the Canadian Arctic Flora: Core Plastid Barcodes (rbcL + matK) for 490 Vascular Plant Species

(2013) Jeffery M. Saarela et al.   PLoS One

Plant DNA barcodes and the influence of gene flow

(2012) YAMAMA NACIRI et al.   Molecular Ecology Resources

Cenozoic extinction and recolonization in the New Zealand flora: The case of the fleshy-fruited epacrids (Styphelieae, Styphelioideae, Ericaceae)

(2012) Caroline Puente-Lelièvre et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

DNA Barcoding the Native Flowering Plants and Conifers of Wales

(2012) Natasha de Vere et al.   PLoS One

DNA Barcoding as an Effective Tool in Improving a Digital Plant Identification System: A Case Study for the Area of Mt. Valerio, Trieste (NE Italy)

(2012) Ilaria Bruni et al.   PLoS One

Identification of the vascular plants of Churchill, Manitoba, using a DNA barcode library

(2012) Maria L Kuzmina et al.   BMC ECOLOGY

RAIphy: Phylogenetic classification of metagenomics samples using iterative refinement of relative abundance index profiles

(2011) Ozkan U Nalbantoglu et al.   BMC BIOINFORMATICS

A rapid screening for adulterants in olive oil using DNA barcodes

(2011) S. Kumar et al.   FOOD CHEMISTRY

The evolution of the plastid chromosome in land plants: gene content, gene order, gene function

(2011) Susann Wicke et al.   PLANT MOLECULAR BIOLOGY

Choosing and Using a Plant DNA Barcode

(2011) Peter M. Hollingsworth et al.   PLoS One

Plant DNA Barcodes Can Accurately Estimate Species Richness in Poorly Known Floras

(2011) Craig Costion et al.   PLoS One

Comparative analysis of a large dataset indicates that internal transcribed spacer (ITS) should be incorporated into the core barcode for seed plants

(2011) et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Discriminating plant species in a local temperate flora using the rbcL+matK DNA barcode

(2011) Kevin S. Burgess et al.   Methods in Ecology and Evolution

Commercial Teas Highlight Plant DNA Barcode Identification Successes and Obstacles

(2011) Mark Y. Stoeckle et al.   Scientific Reports

Picante: R tools for integrating phylogenies and ecology

(2010) S. W. Kembel et al.   BIOINFORMATICS

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Trait similarity, shared ancestry and the structure of neighbourhood interactions in a subtropical wet forest: implications for community assembly

(2010) María Uriarte et al.   ECOLOGY LETTERS

Identification of medicinal plants in the family Fabaceae using a potential DNA barcode ITS2

(2010) Ting Gao et al.   JOURNAL OF ETHNOPHARMACOLOGY

Using next-generation sequencing for molecular reconstruction of past Arctic vegetation and climate

(2010) J. H. SØNSTEBØ et al.   Molecular Ecology Resources

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Validation of the ITS2 Region as a Novel DNA Barcode for Identifying Medicinal Plant Species

(2010) Shilin Chen et al.   PLoS One

Universal Plant DNA Barcode Loci May Not Work in Complex Groups: A Case Study with Indian Berberis Species

(2010) Sribash Roy et al.   PLoS One

Towards barcode markers in Fungi: an intron map of Ascomycota mitochondria

(2009) Monica Santamaria et al.   BMC BIOINFORMATICS

Analysing diet of small herbivores: the efficiency of DNA barcoding coupled with high-throughput pyrosequencing for deciphering the composition of complex plant mixtures

(2009) Eeva M Soininen et al.   Frontiers in Zoology

Conservation of selection on matK following an ancient loss of its flanking intron

(2009) Aaron M. Duffy et al.   GENE

Plant DNA barcodes and species resolution in sedges (Carex, Cyperaceae)

(2009) JULIAN R. STARR et al.   Molecular Ecology Resources

A regional approach to plant DNA barcoding provides high species resolution of sedges (Carex and Kobresia, Cyperaceae) in the Canadian Arctic Archipelago

(2009) JESSICA LE CLERC-BLAIN et al.   Molecular Ecology Resources

The Arctic – an evolutionary freezer?

(2009) Christian Brochmann et al.   Plant Ecology & Diversity

How Many Loci Does it Take to DNA Barcode a Crocus?

(2009) Ole Seberg et al.   PLoS One

Phylogenetic Resolution and Quantifying the Phylogenetic Diversity and Dispersion of Communities

(2009) Nathan G. Swenson   PLoS One

Identification of Amazonian Trees with DNA Barcodes

(2009) Mailyn Adriana Gonzalez et al.   PLoS One

Plant DNA barcodes and a community phylogeny of a tropical forest dynamics plot in Panama

(2009) W. J. Kress et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A DNA barcode for land plants

(2009) et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Barcoding of Plants and Fungi

(2009) M. W. Chase et al.   SCIENCE

Gene flow and species delimitation

(2009) Rémy J. Petit et al.   TRENDS IN ECOLOGY & EVOLUTION

Genetic structuring in three closely related circumpolar plant species: AFLP versus microsatellite markers and high-arctic versus arctic–alpine distributions

(2008) I Skrede et al.   HEREDITY

Relative rates of synonymous substitutions in the mitochondrial, chloroplast and nuclear genomes of seed plants

(2008) G DROUIN et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Multiple Multilocus DNA Barcodes from the Plastid Genome Discriminate Plant Species Equally Well

(2008) Aron J. Fazekas et al.   PLoS One

DNA barcoding the floras of biodiversity hotspots

(2008) R. Lahaye et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Rapid Bootstrap Algorithm for the RAxML Web Servers

(2008) Alexandros Stamatakis et al.   SYSTEMATIC BIOLOGY

Surfing during population expansions promotes genetic revolutions and structuration

(2008) Laurent Excoffier et al.   TRENDS IN ECOLOGY & EVOLUTION