From Lab to Lake – Evaluation of Current Molecular Methods for the Detection of Infectious Enteric Viruses in Complex Water Matrices in an Urban Area

Viability and heat resistance of murine norovirus on bread

(2016) Michiko Takahashi et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Evaluation of viability PCR performance for assessing norovirus infectivity in fresh-cut vegetables and irrigation water

(2016) W. Randazzo et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

DVC-FISH and PMA-qPCR techniques to assess the survival of Helicobacter pylori inside Acanthamoeba castellanii

(2016) Laura Moreno-Mesonero et al.   RESEARCH IN MICROBIOLOGY

Replication of human noroviruses in stem cell-derived human enteroids

(2016) K. Ettayebi et al.   SCIENCE

Viral persistence in surface and drinking water: Suitability of PCR pre-treatment with intercalating dyes

(2016) B. Prevost et al.   WATER RESEARCH

Propidium monoazide RTqPCR assays for the assessment of hepatitis A inactivation and for a better estimation of the health risk of contaminated waters

(2016) Noemí Fuster et al.   WATER RESEARCH

Technical aspects of using human adenovirus as a viral water quality indicator

(2016) Emily Rames et al.   WATER RESEARCH

Foodborne viruses

(2016) Albert Bosch et al.   Current Opinion in Food Science

Effect of DNA extraction procedure, repeated extraction and ethidium monoazide (EMA)/propidium monoazide (PMA) treatment on overall DNA yield and impact on microbial fingerprints for bacteria, fungi and archaea in a reference soil

(2015) Andreas O. Wagner et al.   APPLIED SOIL ECOLOGY

Application of flow cytometry and PMA-qPCR to distinguish between membrane intact and membrane compromised bacteria cells in an aquatic milieu

(2015) Nicole Zacharias et al.   INTERNATIONAL JOURNAL OF HYGIENE AND ENVIRONMENTAL HEALTH

Reducing pathogens in combined sewer overflows using ozonation or UV irradiation

(2015) Katharina Tondera et al.   INTERNATIONAL JOURNAL OF HYGIENE AND ENVIRONMENTAL HEALTH

Use of ethidium monoazide and propidium monoazide to determine viral infectivity upon inactivation by heat, UV- exposure and chlorine

(2015) Mats Leifels et al.   INTERNATIONAL JOURNAL OF HYGIENE AND ENVIRONMENTAL HEALTH

Molecular epidemiology and surveillance of circulating rotavirus and adenovirus in Congolese children with gastroenteritis

(2015) Gontran Mayindou et al.   JOURNAL OF MEDICAL VIROLOGY

Propidium monoazide (PMA) and ethidium bromide monoazide (EMA) improve DNA array and high-throughput sequencing of porcine reproductive and respiratory syndrome virus identification

(2015) Christian Bellehumeur et al.   JOURNAL OF VIROLOGICAL METHODS

Propidium monoazide reverse transcriptase PCR and RT-qPCR for detecting infectious enterovirus and norovirus

(2015) Mohammad R. Karim et al.   JOURNAL OF VIROLOGICAL METHODS

Removal of Contaminant DNA by Combined UV-EMA Treatment Allows Low Copy Number Detection of Clinically Relevant Bacteria Using Pan-Bacterial Real-Time PCR

(2015) Bruce Humphrey et al.   PLoS One

Estimating the herd immunity effect of rotavirus vaccine

(2015) Suzanne L. Pollard et al.   VACCINE

Organic Substances Interfere with Reverse Transcription-Quantitative PCR-Based Virus Detection in Water Samples

(2014) Akihiko Hata et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Overestimation of the Legionella spp. load in environmental samples by quantitative real-time PCR: pretreatment with propidium monoazide as a tool for the assessment of an association between Legionella concentration and sanitary risk

(2014) Savina Ditommaso et al.   DIAGNOSTIC MICROBIOLOGY AND INFECTIOUS DISEASE

Development of a Luminex assay for the simultaneous detection of human enteric viruses in sewage and river water

(2014) Ibrahim A. Hamza et al.   JOURNAL OF VIROLOGICAL METHODS

Rapid detection and quantification of viable potato cyst nematodes using qPCR in combination with propidium monoazide

(2014) Μ. Christoforou et al.   PLANT PATHOLOGY

Burden of disease from inadequate water, sanitation and hygiene in low- and middle-income settings: a retrospective analysis of data from 145 countries

(2014) Annette Prüss-Ustün et al.   TROPICAL MEDICINE & INTERNATIONAL HEALTH

Estimating the impact of unsafe water, sanitation and hygiene on the global burden of disease: evolving and alternative methods

(2014) Thomas Clasen et al.   TROPICAL MEDICINE & INTERNATIONAL HEALTH

Discrimination of infectious hepatitis A virus and rotavirus by combining dyes and surfactants with RT-qPCR

(2013) Coralie Coudray-Meunier et al.   BMC MICROBIOLOGY

Molecular characterization of rotavirus genotypes in immunosuppressed and non-immunosuppressed pediatric patients

(2013) Luciane A. Pereira et al.   Jornal de Pediatria

An improved infectivity assay combining cell culture with real-time PCR for rapid quantification of human adenoviruses 41 and semi-quantification of human adenovirus in sewage

(2013) Roberto A. Rodríguez et al.   WATER RESEARCH

Evaluation of human adenovirus and human polyomavirus as indicators of human sewage contamination in the aquatic environment

(2013) Joanne Hewitt et al.   WATER RESEARCH

Quantification of Human and Animal Viruses to Differentiate the Origin of the Fecal Contamination Present in Environmental Samples

(2013) Sílvia Bofill-Mas et al.   Biomed Research International

Methods to detect infectious human enteric viruses in environmental water samples

(2011) Ibrahim Ahmed Hamza et al.   INTERNATIONAL JOURNAL OF HYGIENE AND ENVIRONMENTAL HEALTH

Discrimination of Viable Acanthamoeba castellani Trophozoites and Cysts by Propidium Monoazide Real-Time Polymerase Chain Reaction

(2011) MARIANA FITTIPALDI et al.   JOURNAL OF EUKARYOTIC MICROBIOLOGY

Development of Cystic Periventricular Leukomalacia in Newborn Infants after Rotavirus Infection

(2011) Malgorzata A. Verboon-Maciolek et al.   JOURNAL OF PEDIATRICS

Use of Propidium Monoazide in Reverse Transcriptase PCR To Distinguish between Infectious and Noninfectious Enteric Viruses in Water Samples

(2010) S. Parshionikar et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Determination of viable wine yeast using DNA binding dyes and quantitative PCR

(2010) Imma Andorrà et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Assessment of adenovirus, hepatitis A virus and rotavirus presence in environmental samples in Florianopolis, South Brazil

(2010) C. Rigotto et al.   JOURNAL OF APPLIED MICROBIOLOGY

Molecular identification and full genome analysis of an echovirus 7 strain isolated from the environment in Greece

(2010) Zaharoula Kyriakopoulou et al.   VIRUS GENES

Molecular detection of pathogens in water – The pros and cons of molecular techniques

(2010) Rosina Girones et al.   WATER RESEARCH

Source water quality effects on monochloramine inactivation of adenovirus, coxsackievirus, echovirus, and murine norovirus

(2010) Amy M. Kahler et al.   WATER RESEARCH

Evaluation of pepper mild mottle virus, human picobirnavirus and Torque teno virus as indicators of fecal contamination in river water

(2010) Ibrahim Ahmed Hamza et al.   WATER RESEARCH

Discrimination of Viable and Dead Fecal Bacteroidales Bacteria by Quantitative PCR with Propidium Monoazide

(2009) S. Bae et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Quantification of Giardia transcripts during in vitro excystation: Interest for the estimation of cyst viability

(2009) Isabelle Bertrand et al.   WATER RESEARCH

Detection of human viruses in rivers of a densly-populated area in Germany using a virus adsorption elution method optimized for PCR analyses

(2009) Ibrahim Ahmed Hamza et al.   WATER RESEARCH

UV inactivation and resistance of rotavirus evaluated by integrated cell culture and real-time RT-PCR assay

(2009) Dan Li et al.   WATER RESEARCH

Detection of naturally occurring enteroviruses in waters using direct RT-PCR and integrated cell culture-RT-PCR

(2008) Y.C. Shieh et al.   JOURNAL OF VIROLOGICAL METHODS

Quantifying fungal viability in air and water samples using quantitative PCR after treatment with propidium monoazide (PMA)

(2007) Stephen Vesper et al.   JOURNAL OF MICROBIOLOGICAL METHODS