A New Method for Identifying Essential Proteins Based on Network Topology Properties and Protein Complexes

United Complex Centrality for Identification of Essential Proteins from PPI Networks

(2017) Min Li et al.   IEEE-ACM Transactions on Computational Biology and Bioinformatics

CytoNCA: A cytoscape plugin for centrality analysis and evaluation of protein interaction networks

(2015) Yu Tang et al.   BIOSYSTEMS

Identification of Essential Proteins Based on a New Combination of Local Interaction Density and Protein Complexes

(2015) Jiawei Luo et al.   PLoS One

Predicting Essential Proteins Based on Weighted Degree Centrality

(2014) Xiwei Tang et al.   IEEE-ACM Transactions on Computational Biology and Bioinformatics

Identification of Essential Proteins Based on Ranking Edge-Weights in Protein-Protein Interaction Networks

(2014) Yan Wang et al.   PLoS One

A New Method for the Discovery of Essential Proteins

(2013) Xue Zhang et al.   PLoS One

Iteration method for predicting essential proteins based on orthology and protein-protein interaction networks

(2012) Wei Peng et al.   BMC Systems Biology

A new essential protein discovery method based on the integration of protein-protein interaction and gene expression data

(2012) Min Li et al.   BMC Systems Biology

A local average connectivity-based method for identifying essential proteins from the network level

(2011) Min Li et al.   COMPUTATIONAL BIOLOGY AND CHEMISTRY

Identification of Essential Proteins Based on Edge Clustering Coefficient

(2011) Jianxin Wang et al.   IEEE-ACM Transactions on Computational Biology and Bioinformatics

Computational prediction of essential genes in an unculturable endosymbiotic bacterium, Wolbachia of Brugia malayi

(2009) Alexander G Holman et al.   BMC MICROBIOLOGY

How to identify essential genes from molecular networks?

(2009) Gabriel del Rio et al.   BMC Systems Biology

Bootstrapping the Interactome: Unsupervised Identification of Protein Complexes in Yeast

(2009) Caroline C. Friedel et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

CORUM: the comprehensive resource of mammalian protein complexes—2009

(2009) Andreas Ruepp et al.   NUCLEIC ACIDS RESEARCH

Localized network centrality and essentiality in the yeast–protein interaction network

(2009) Keunwan Park et al.   PROTEOMICS

Up-to-date catalogues of yeast protein complexes

(2008) Shuye Pu et al.   NUCLEIC ACIDS RESEARCH

DEG 5.0, a database of essential genes in both prokaryotes and eukaryotes

(2008) R. Zhang et al.   NUCLEIC ACIDS RESEARCH

Why Do Hubs in the Yeast Protein Interaction Network Tend To Be Essential: Reexamining the Connection between the Network Topology and Essentiality

(2008) Elena Zotenko et al.   PLoS Computational Biology