On the Accuracy of Genomic Selection

Genetic diversity and trait genomic prediction in a pea diversity panel

(2015) Judith Burstin et al.   BMC GENOMICS

Genomic Selection and Association Mapping in Rice (Oryza sativa): Effect of Trait Genetic Architecture, Training Population Composition, Marker Number and Statistical Model on Accuracy of Rice Genomic Selection in Elite, Tropical Rice Breeding Lines

(2015) Jennifer Spindel et al.   PLoS Genetics

Genomewide Prediction Accuracy within 969 Maize Biparental Populations

(2014) Lian Lian et al.   CROP SCIENCE

Bridging the gap between marker-assisted and genomic selection of heading time and plant height in hybrid wheat

(2014) Y Zhao et al.   HEREDITY

Is the use of formulae a reliable way to predict the accuracy of genomic selection?

(2014) S. Brard et al.   JOURNAL OF ANIMAL BREEDING AND GENETICS

Enhancing Genome-Enabled Prediction by Bagging Genomic BLUP

(2014) Daniel Gianola et al.   PLoS One

Statistical significance in high-dimensional linear models

(2013) Peter Bühlmann   BERNOULLI

Genomic selection in sugar beet breeding populations

(2013) Tobias Würschum et al.   BMC GENETICS

Genomic BLUP Decoded: A Look into the Black Box of Genomic Prediction

(2013) D. Habier et al.   GENETICS

Prospects for genomic selection in forage plant species

(2013) Benjamin J. Hayes et al.   PLANT BREEDING

Genome Wide Allele Frequency Fingerprints (GWAFFs) of Populations via Genotyping by Sequencing

(2013) Stephen Byrne et al.   PLoS One

Likelihood ratio test process for quantitative trait locus detection

(2013) Jean-Marc Azaïs et al.   STATISTICS

Prediction of Complex Human Traits Using the Genomic Best Linear Unbiased Predictor

(2013) Gustavo de los Campos et al.   PLoS Genetics

Estimation in high-dimensional linear models with deterministic design matrices

(2012) Jun Shao et al.   ANNALS OF STATISTICS

Quantitative Trait Locus (QTL) meta-analysis and comparative genomics for candidate gene prediction in perennial ryegrass (Lolium perenne L.)

(2012) Hiroshi Shinozuka et al.   BMC GENETICS

Genomic Selection using Multiple Populations

(2012) T. Schulz-Streeck et al.   CROP SCIENCE

Back to Basics for Bayesian Model Building in Genomic Selection

(2012) Hanni P. Kärkkäinen et al.   GENETICS

Whole-Genome Regression and Prediction Methods Applied to Plant and Animal Breeding

(2012) G. de los Campos et al.   GENETICS

Maximizing the Reliability of Genomic Selection by Optimizing the Calibration Set of Reference Individuals: Comparison of Methods in Two Diverse Groups of Maize Inbreds (Zea mays L.)

(2012) R. Rincent et al.   GENETICS

Genomic Selection for Fruit Quality Traits in Apple (Malus×domestica Borkh.)

(2012) Satish Kumar et al.   PLoS One

Detection of favorable alleles for plant height and crown rust tolerance in three connected populations of perennial ryegrass (Lolium perenne L.)

(2012) Laurence Pauly et al.   THEORETICAL AND APPLIED GENETICS

Overview of LASSO-related penalized regression methods for quantitative trait mapping and genomic selection

(2012) Zitong Li et al.   THEORETICAL AND APPLIED GENETICS

Genomic selection in French dairy cattle

(2012) D. Boichard et al.   Animal Production Science

Genomic selection in plant breeding: from theory to practice

(2011) J.-L. Jannink et al.   Briefings in Functional Genomics

Novel measures of linkage disequilibrium that correct the bias due to population structure and relatedness

(2011) B Mangin et al.   HEREDITY

Using the genomic relationship matrix to predict the accuracy of genomic selection

(2011) M.E. Goddard et al.   JOURNAL OF ANIMAL BREEDING AND GENETICS

Reliability of direct genomic values for animals with different relationships within and to the reference population

(2011) M. Pszczola et al.   JOURNAL OF DAIRY SCIENCE

Genome-based prediction of testcross values in maize

(2011) Theresa Albrecht et al.   THEORETICAL AND APPLIED GENETICS

Accuracy and Training Population Design for Genomic Selection on Quantitative Traits in Elite North American Oats

(2011) Franco G. Asoro et al.   Plant Genome

Ridge Regression and Other Kernels for Genomic Selection with R Package rrBLUP

(2011) Jeffrey B. Endelman   Plant Genome

The Impact of Genetic Architecture on Genome-Wide Evaluation Methods

(2010) H. D. Daetwyler et al.   GENETICS

Semi-parametric genomic-enabled prediction of genetic values using reproducing kernel Hilbert spaces methods

(2010) GUSTAVO DE LOS CAMPOS et al.   Genetics Research

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

(2010) A. McKenna et al.   GENOME RESEARCH

Common SNPs explain a large proportion of the heritability for human height

(2010) Jian Yang et al.   NATURE GENETICS

Predicting genetic predisposition in humans: the promise of whole-genome markers

(2010) Gustavo de los Campos et al.   NATURE REVIEWS GENETICS

A Commentary on ‘Common SNPs Explain a Large Proportion of the Heritability for Human Height’ by Yang et al. (2010)

(2010) Peter M. Visscher et al.   Twin Research and Human Genetics

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Invited review: Genomic selection in dairy cattle: Progress and challenges

(2009) B.J. Hayes et al.   JOURNAL OF DAIRY SCIENCE

Finding the missing heritability of complex diseases

(2009) Teri A. Manolio et al.   NATURE

Mapping genes for complex traits in domestic animals and their use in breeding programmes

(2009) Michael E. Goddard et al.   NATURE REVIEWS GENETICS

Potential etiologic and functional implications of genome-wide association loci for human diseases and traits

(2009) L. A. Hindorff et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Genetic Architecture of Maize Flowering Time

(2009) E. S. Buckler et al.   SCIENCE

Genomic selection: prediction of accuracy and maximisation of long term response

(2008) Mike Goddard   GENETICA

Personal genomes: The case of the missing heritability

(2008) Brendan Maher   NATURE

Progress and challenges in genome-wide association studies in humans

(2008) Peter Donnelly   NATURE

Genome-wide association analysis identifies 20 loci that influence adult height

(2008) Michael N Weedon et al.   NATURE GENETICS

Identification of ten loci associated with height highlights new biological pathways in human growth

(2008) Guillaume Lettre et al.   NATURE GENETICS

Genome-wide association defines more than 30 distinct susceptibility loci for Crohn's disease

(2008) Jeffrey C Barrett et al.   NATURE GENETICS

Accuracy of Predicting the Genetic Risk of Disease Using a Genome-Wide Approach

(2008) Hans D. Daetwyler et al.   PLoS One