Multilocus Phylogeography of the Treefrog Scinax eurydice (Anura, Hylidae) Reveals a Plio-Pleistocene Diversification in the Atlantic Forest

Insights into the origin and distribution of biodiversity in the Brazilian Atlantic forest hot spot: a statistical phylogeographic study using a low-dispersal organism

(2014) M Álvarez-Presas et al.   HEREDITY

Barriers, rather than refugia, underlie the origin of diversity in toads endemic to the Brazilian Atlantic Forest

(2014) Maria Tereza C. Thomé et al.   MOLECULAR ECOLOGY

Biogeographic Distribution Patterns and Their Correlates in the Diverse Frog Fauna of the Atlantic Forest Hotspot

(2014) Tiago S. Vasconcelos et al.   PLoS One

High Levels of Diversity Uncovered in a Widespread Nominal Taxon: Continental Phylogeography of the Neotropical Tree Frog Dendropsophus minutus

(2014) Marcelo Gehara et al.   PLoS One

Prediction of phylogeographic endemism in an environmentally complex biome

(2014) A. C. Carnaval et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Species limits, phylogeographic and hybridization patterns in Neotropical leaf frogs (Phyllomedusinae)

(2014) Tuliana O. Brunes et al.   ZOOLOGICA SCRIPTA

From widespread to microendemic: molecular and acoustic analyses show that Ischnocnema guentheri (Amphibia: Brachycephalidae) is endemic to Rio de Janeiro, Brazil

(2013) Marcelo Gehara et al.   CONSERVATION GENETICS

Phylogeographic structure is strong in the Atlantic Forest; predictive power of correlative paleodistribution models, not always

(2013) João Filipe Riva Tonini et al.   JOURNAL OF ZOOLOGICAL SYSTEMATICS AND EVOLUTIONARY RESEARCH

Molecular systematics and evolution of the Synallaxis ruficapilla complex (Aves: Furnariidae) in the Atlantic Forest

(2013) Henrique Batalha-Filho et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Cryptic Genetic Diversity Is Paramount in Small-Bodied Amphibians of the Genus Euparkerella (Anura: Craugastoridae) Endemic to the Brazilian Atlantic Forest

(2013) Luciana A. Fusinatto et al.   PLoS One

Climatic oscillations shape the phylogeographical structure of Atlantic Forest fire-eye antbirds (Aves: Thamnophilidae)

(2012) MARCOS MALDONADO-COELHO   BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

The interplay of dispersal limitation, rivers, and historical events shapes the genetic structure of an Amazonian frog

(2012) ANTOINE FOUQUET et al.   BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

The biogeography of mitochondrial and nuclear discordance in animals

(2012) DAVID P. L. TOEWS et al.   MOLECULAR ECOLOGY

Phylogeography of an Atlantic forest passerine reveals demographic stability through the last glacial maximum

(2012) Henrique Batalha-Filho et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

jModelTest 2: more models, new heuristics and parallel computing

(2012) Diego Darriba et al.   NATURE METHODS

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

The genetic effects of Late Quaternary climatic changes over a tropical latitudinal gradient: diversification of an Atlantic Forest passerine

(2011) FERNANDO M. D’HORTA et al.   MOLECULAR ECOLOGY

Molecular phylogenetic relationships and phenotypic diversity in miniaturized toadlets, genus Brachycephalus (Amphibia: Anura: Brachycephalidae)

(2011) Rute B.G. Clemente-Carvalho et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Demographic processes in the montane Atlantic rainforest: Molecular and cytogenetic evidence from the endemic frog Proceratophrys boiei

(2011) Renata Cecília Amaro et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

STRUCTURE HARVESTER: a website and program for visualizing STRUCTURE output and implementing the Evanno method

(2011) Dent A. Earl et al.   Conservation Genetics Resources

Phylogeography and historical demography of the neotropical stingless beeMelipona quadrifasciata(Hymenoptera, Apidae): incongruence between morphology and mitochondrial DNA

(2010) Henrique Batalha-Filho et al.   APIDOLOGIE

DensiTree: making sense of sets of phylogenetic trees

(2010) R. R. Bouckaert   BIOINFORMATICS

Phylogeography of the endangered rosewood Dalbergia nigra (Fabaceae): insights into the evolutionary history and conservation of the Brazilian Atlantic Forest

(2010) R A Ribeiro et al.   HEREDITY

Phylogeography of endemic toads and post-Pliocene persistence of the Brazilian Atlantic Forest

(2010) Maria Tereza C. Thomé et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

DnaSP v5: a software for comprehensive analysis of DNA polymorphism data

(2009) P. Librado et al.   BIOINFORMATICS

The Brazilian Atlantic Forest: How much is left, and how is the remaining forest distributed? Implications for conservation

(2009) Milton Cezar Ribeiro et al.   BIOLOGICAL CONSERVATION

Phylogeography of the common vampire bat (Desmodus rotundus): Marked population structure, Neotropical Pleistocene vicariance and incongruence between nuclear and mtDNA markers

(2009) Felipe M Martins et al.   BMC EVOLUTIONARY BIOLOGY

How Robust Are "Isolation with Migration" Analyses to Violations of the IM Model? A Simulation Study

(2009) J. L. Strasburg et al.   MOLECULAR BIOLOGY AND EVOLUTION

The Divergence of Chimpanzee Species and Subspecies as Revealed in Multipopulation Isolation-with-Migration Analyses

(2009) J. Hey   MOLECULAR BIOLOGY AND EVOLUTION

Stability Predicts Genetic Diversity in the Brazilian Atlantic Forest Hotspot

(2009) A. C. Carnaval et al.   SCIENCE

Historical climate modelling predicts patterns of current biodiversity in the Brazilian Atlantic forest

(2008) Ana Carolina Carnaval et al.   JOURNAL OF BIOGEOGRAPHY

Microrefugia

(2008) Valentí Rull   JOURNAL OF BIOGEOGRAPHY

Nuclear and mitochondrial phylogeography of the Atlantic forest endemic Xiphorhynchus fuscus (Aves: Dendrocolaptidae): Biogeography and systematics implications

(2008) G CABANNE et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION